Gene GM21_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0961 
Symbol 
ID8136282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1137320 
End bp1138513 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content64% 
IMG OID644868575 
Productaspartate aminotransferase 
Protein accessionYP_003020784 
Protein GI253699595 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.173671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTCG CCGATAAGAT AGCCGGTTTC ATAGCGAAAT CATCGTGGAT CAGGAAGATG 
TTCGAGGAAG GGGAGAAGCT CAGGTCCCAG TTCGGGGCCG ACAAGGTCTA CGACTTCACC
CTGGGCAACC CCGACGTGGA GCCCCCGCAG CCCTTCCGCG ACGAGTTCCT GAAGCTCGCC
AAGTCCCCCG TCCAGGGGAT GCACCGTTAC ATGAACAACG CGGGCTACAT CGAGACCAGG
AACGCCGTGG CGCGCATGCT TTCCGCGGCT TCCGATCTGC CGGTGCAGGG GAGCCAGGTG
GTGATGACCT GCGGGGCGGG GGGCGCGCTC AACGTGGTGC TGAAGACCAT CCTCAACCCC
GGGGACGAGG TGATCATCCT CACCCCCTAC TTCGTCGAAT ACCGCTTCTA CATCGACAAC
CACGGCGGCG TTCCGGTCGA GGTCTGGACC GACCGCGAGA CCTTCCAGCT CGACGTCGCC
GCCATCGGCG CCGCCATCAC CGCCAAGACC CGCGCCATCA TCATCTGCTC GCCCAACAAC
CCCACCGGGG TCATCTATCC CGCCGAGAGC CTCGCCGCCC TGGGCGAAGT GGTGGCAGCC
AAGGAGAAGG AACTCGGGCG CCAGATCTGC GTCATCTCCG ACGAGCCCTA CGCGAGGATC
AGCTACGAGG GGAAGAGCGT CCCCAACATC TTCCGCTACG TCGCCAACTC CGTCATCGTC
ACCTCGCATT CCAAGGATCT CGCCCTTCCC GGCGAGCGCA TCGGCTATCT GGCCGCGAAC
CCGAGGATGA AGGACGTGGA ACAGTTCATG GAAGGGGCGG TCTTCTCCAA CCGGGTGCTC
GGCTTCGTCA ACGCGCCGGC GCTCATGCAA AGGCTCGTGG CTGGGCTGCA GCACGTCTCG
GTGGACATCG GCGCCTACCG GGAAAAGCGC GACCTCCTTT ACGACTCGCT CACGAAGCTC
GGCTTCAGCA TGGTGAAGCC CGACGGCGCC TTTTACTTCT TCCCGAAGTC GCCCTTATCC
GACGACATCG AGTTCGTTAA GCTGGCCCAA AAGCACCGCA TCCTGCTGGT TCCCGGCGCC
GGCTTCGGCG CCCCCGGCTA CTTCCGGATC GCCTACTGCG TCGACAAGGC GATGATCGAG
AGGAGCATCC CCGCCTGGGC GGAACTCGCG CGCGAAGCGG GGCTTGCCGG TTGA
 
Protein sequence
MPVADKIAGF IAKSSWIRKM FEEGEKLRSQ FGADKVYDFT LGNPDVEPPQ PFRDEFLKLA 
KSPVQGMHRY MNNAGYIETR NAVARMLSAA SDLPVQGSQV VMTCGAGGAL NVVLKTILNP
GDEVIILTPY FVEYRFYIDN HGGVPVEVWT DRETFQLDVA AIGAAITAKT RAIIICSPNN
PTGVIYPAES LAALGEVVAA KEKELGRQIC VISDEPYARI SYEGKSVPNI FRYVANSVIV
TSHSKDLALP GERIGYLAAN PRMKDVEQFM EGAVFSNRVL GFVNAPALMQ RLVAGLQHVS
VDIGAYREKR DLLYDSLTKL GFSMVKPDGA FYFFPKSPLS DDIEFVKLAQ KHRILLVPGA
GFGAPGYFRI AYCVDKAMIE RSIPAWAELA REAGLAG