| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0952 |
|---|
| Symbol | |
|---|
| ID | 8136273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 1129548 |
|---|
| End bp | 1130996 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644868567 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003020776 |
|---|
| Protein GI | 253699587 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 73 |
|---|
| Fosmid unclonability p-value | 0.483334 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAA TGATCAAGTA CAGGCTGTTG ATCGCCATGC TCGCCGCGAC CGGCGCCGTG
GTGATCTCGA TGTTTCTCAT CATGCAGTGG AGCATCGGGC GCGGCTTCCT GGCCTACGTG
AACACCATGG AAAAAGATCG GCTCGAACGG CTCGCCCAGG TGATGGAGCG GGCGTACCGC
ACCAACGGCA GCTGGGACTT CATAAAGGGA GACGAAGCTA CCTTGTTCAA ACTGGTTGCA
GCCAGCAGGG AGACGAACGA CCTGGACCGG AGCGACCGCG GCGAGCGGAG AATGCGCCCC
CCCCCGCCGT TTCCCAACCG CTCCGGGCAC TCCTTCCCGG CGCGCTTCCA GTACCGTTTC
GAGGGAAGGG TGCTGCTGCT CGATGCACAA AAGGTGAAAC TGGTCGGCAT GCCGAGCGCC
CAGGAGGCGG CGCAACTGCA CGAAATCACG AGCTCCGACC GCATCGTCGG CTACGTGGGG
CTGCGCCCCA GGCAGCGCCT CACCGACACC TATCAACTCC TTTTCGTCAA GCAGCAGAAA
CTCACCATGG GGCTCGTGGC GGTGATCATG TTCCTCGTTT CCGCTGCGAT CTCGCTCCCT
TTGGCCCACC GCCTGGTGCT CCCCATCAAG AGGCTCGCAG CCTCCATGCA CCGCTTAGCC
TCCGGCGAGT ACGGCACCAG GGTGGCGGTC GGCCCCGAGG ACGAACTTGG GCAACTGGCC
CGCGACTTCA ACACGCTCGC GCTGACGCTG GAGAACAACG AACGGGCGCG AAGGCGCTGG
GTGGCGGACG TCTCGCACGA GCTGCGCACG CCGCTTGCCA TCCTGCGCGG GGAGATCGAG
GCGATCCAGG ACGGCGTGCG CCAGGCAGGC CCGGAGTCGA TGCGCTCCCT GCACGGCGAG
GTCATGCACC TAAGCCGCCT GGTCGACGAT CTCTACCAGC TCTCCCTTTA CGACATCGGG
GCGCTGACCT ACCGCAAAGA GAGTGTCGAT CTTAAGGAGG TGCTGGAGGA TGCGCTGACT
TCGGTCGGGC AGGAATTAAT CCAGAAGGGA ATCAACCTCT CCATCGAGCT GCCGCGAGAC
GACGGCTGCT CCGTCTTCGC CGACCCTGAC CGGTTGAGCC AGCTTTTCTC GAACCTTTTG
GACAACTCGC TCAAGTACAC AGATGCCGGG GGGAAACTGG CGGTCAGGCT CCAGCGCGGG
CCGAACACGG CGCAGGTCGA GTTCGCCGAC AGCGCGCCGG GCGTGGCACC GGACCAGTTG
CAGCGCCTCT TCGACAGGCT GTACCGGGTG GAAAGCTCGC GTAACCGCGC CAAAGGGGGC
GCGGGGCTGG GCCTTGCCAT CTGCAAGAAC ATCGTGGAGG CCCACGAAGG AACCATAGCC
GCCCTCCCCT CCCCGCACGG CGGGGTGCTG ATCAGGGTGG AACTGCCGCT TATCGGGAGC
AGGACATGA
|
|---|
| Protein sequence | MKIMIKYRLL IAMLAATGAV VISMFLIMQW SIGRGFLAYV NTMEKDRLER LAQVMERAYR
TNGSWDFIKG DEATLFKLVA ASRETNDLDR SDRGERRMRP PPPFPNRSGH SFPARFQYRF
EGRVLLLDAQ KVKLVGMPSA QEAAQLHEIT SSDRIVGYVG LRPRQRLTDT YQLLFVKQQK
LTMGLVAVIM FLVSAAISLP LAHRLVLPIK RLAASMHRLA SGEYGTRVAV GPEDELGQLA
RDFNTLALTL ENNERARRRW VADVSHELRT PLAILRGEIE AIQDGVRQAG PESMRSLHGE
VMHLSRLVDD LYQLSLYDIG ALTYRKESVD LKEVLEDALT SVGQELIQKG INLSIELPRD
DGCSVFADPD RLSQLFSNLL DNSLKYTDAG GKLAVRLQRG PNTAQVEFAD SAPGVAPDQL
QRLFDRLYRV ESSRNRAKGG AGLGLAICKN IVEAHEGTIA ALPSPHGGVL IRVELPLIGS
RT
|
|---|
| |