Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0918 |
Symbol | |
ID | 8136239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1093954 |
End bp | 1094847 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644868534 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_003020743 |
Protein GI | 253699554 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 2.0046e-32 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTAGGGA TGTCTTCCGA CAAGTTGCTG AACAGCCTTT TCGACGGCCT TTACTGCGTC GATCTGGACC GGCGCATCTC CTTTTGGAAC AGTGCCGCCC AGAGGATAAC GGGGTACAGC GCCGAGGAAG TGCTCGGCTC CAACCGCCAC GACTCCATCC TGCGCCGTGT CGAGGTCGAC GGGTACGAAT GCGAGGTGAA GTGCCCCTTG GCGGCGACCA TCGCCGACGG CAAGGTACGG GAGGCTAACG TGCTGGTGCA CCACAAGCAC GGCTACCGCC TCCCGGTGCA GGTGCGCACC TCTCCGGTGA GAAACGAAGC CGGGACCATA GTCGGCGCCG TCGAAATATT CACCGACAAC TCCAACTCGG TGCAGATCCT CGCAGCGCTG GAACAGCTGA AGCAGGACGT GCTGGTTGAT CCGCTCACCG GGGTGGGGAA TCGCAGGCTG GCGGACATGT CGCTGGAGTC GAGGCTGCAC GACTGGCAGA CGCACCGCAG GCCCTTCGGC GTGCTCTTCA TGGATGTCGA CCATTTCAAA AGCGTCAACG ACCGCTACGG ACATAAGACC GGCGACGAGG TGTTGCGCAT GCTGGGAAAG ACCATATCCA ATACGTTCAG AAAGGTGGAT ACCGTGGCGC GTTGGGGGGG GGAGGAATTC GTGGCCATTC TTCCCGCCAC GAGGCTCCCC GCGCTGGCCT CCATAGCCGA ACGAGTCAGA AGCGCGGTAG CCGGTTCCTT CCTGATGGAG GAAGGCCAGA GGGTCGGCGT CACCCTCTCC ATCGGCGGGA CCATAGCCGA GACGGGGGAT AACGCCGAAA GCATCATAAG CAGGGCGGAC GCGCAGATGT ATCGGAGCAA GGCCGGCGGC CGGAACCTGG TCACCCTGCG CTAG
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Protein sequence | MLGMSSDKLL NSLFDGLYCV DLDRRISFWN SAAQRITGYS AEEVLGSNRH DSILRRVEVD GYECEVKCPL AATIADGKVR EANVLVHHKH GYRLPVQVRT SPVRNEAGTI VGAVEIFTDN SNSVQILAAL EQLKQDVLVD PLTGVGNRRL ADMSLESRLH DWQTHRRPFG VLFMDVDHFK SVNDRYGHKT GDEVLRMLGK TISNTFRKVD TVARWGGEEF VAILPATRLP ALASIAERVR SAVAGSFLME EGQRVGVTLS IGGTIAETGD NAESIISRAD AQMYRSKAGG RNLVTLR
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