Gene GM21_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0918 
Symbol 
ID8136239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1093954 
End bp1094847 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content62% 
IMG OID644868534 
Productdiguanylate cyclase with PAS/PAC sensor 
Protein accessionYP_003020743 
Protein GI253699554 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.0046e-32 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTAGGGA TGTCTTCCGA CAAGTTGCTG AACAGCCTTT TCGACGGCCT TTACTGCGTC 
GATCTGGACC GGCGCATCTC CTTTTGGAAC AGTGCCGCCC AGAGGATAAC GGGGTACAGC
GCCGAGGAAG TGCTCGGCTC CAACCGCCAC GACTCCATCC TGCGCCGTGT CGAGGTCGAC
GGGTACGAAT GCGAGGTGAA GTGCCCCTTG GCGGCGACCA TCGCCGACGG CAAGGTACGG
GAGGCTAACG TGCTGGTGCA CCACAAGCAC GGCTACCGCC TCCCGGTGCA GGTGCGCACC
TCTCCGGTGA GAAACGAAGC CGGGACCATA GTCGGCGCCG TCGAAATATT CACCGACAAC
TCCAACTCGG TGCAGATCCT CGCAGCGCTG GAACAGCTGA AGCAGGACGT GCTGGTTGAT
CCGCTCACCG GGGTGGGGAA TCGCAGGCTG GCGGACATGT CGCTGGAGTC GAGGCTGCAC
GACTGGCAGA CGCACCGCAG GCCCTTCGGC GTGCTCTTCA TGGATGTCGA CCATTTCAAA
AGCGTCAACG ACCGCTACGG ACATAAGACC GGCGACGAGG TGTTGCGCAT GCTGGGAAAG
ACCATATCCA ATACGTTCAG AAAGGTGGAT ACCGTGGCGC GTTGGGGGGG GGAGGAATTC
GTGGCCATTC TTCCCGCCAC GAGGCTCCCC GCGCTGGCCT CCATAGCCGA ACGAGTCAGA
AGCGCGGTAG CCGGTTCCTT CCTGATGGAG GAAGGCCAGA GGGTCGGCGT CACCCTCTCC
ATCGGCGGGA CCATAGCCGA GACGGGGGAT AACGCCGAAA GCATCATAAG CAGGGCGGAC
GCGCAGATGT ATCGGAGCAA GGCCGGCGGC CGGAACCTGG TCACCCTGCG CTAG
 
Protein sequence
MLGMSSDKLL NSLFDGLYCV DLDRRISFWN SAAQRITGYS AEEVLGSNRH DSILRRVEVD 
GYECEVKCPL AATIADGKVR EANVLVHHKH GYRLPVQVRT SPVRNEAGTI VGAVEIFTDN
SNSVQILAAL EQLKQDVLVD PLTGVGNRRL ADMSLESRLH DWQTHRRPFG VLFMDVDHFK
SVNDRYGHKT GDEVLRMLGK TISNTFRKVD TVARWGGEEF VAILPATRLP ALASIAERVR
SAVAGSFLME EGQRVGVTLS IGGTIAETGD NAESIISRAD AQMYRSKAGG RNLVTLR