| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0895 |
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| Symbol | trpA |
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| ID | 8136216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1068503 |
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| End bp | 1069306 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644868511 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_003020720 |
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| Protein GI | 253699531 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 2.76e-31 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAGGA TTTCAGATAG ATTTGCCAGC CTGAAAGAGC GGGGGGAAAA GGCGCTCGTT
ACCTTCGTCA CCGCGGGCGA CCCGGATCTG GCGACCACGG AAAAGGTGGT GCTTGAACTC
GAGCGGGCAG GGGCCGACTT GGTCGAGTTG GGAGTCCCCT TCTCCGATCC CATGGCCGAC
GGCCCGACCA TCCAGCTCTC CTCGGACCGA GCCCTGGCCT CCGGCACCAC GCTTCCGGCG
ATACTGGAGC TTGTATCGAG GCTCAGGGAA AAGACCCAGG TCCCCATCGT GCTGATGGGT
TATTTCAACC CCATCTTCGC CTACGGTTCC GAGCGCTTTG CCTTCGACGC GGCCCAGGCG
GGTGTCGACG CCCTGCTGGT GGTGGATCTC CCCCCCGAGG AGGCCGCGGA GCTGAAAGGA
GCCACCGACA GCTGCGGGCT CGACCTCATC TTCCTCCTCA CCCCGACCTC AGACAGCTCC
AGGGTCGCTA TGGTCGCGCG CCAGGGAAGC GGCTTCATCT ACTACGTCTC CGTCACCGGC
GTCACCGGCG CGCGCAGCGC GGTCGCCGAC GACCTGGCGG CCCGGGTCAC CGAGGTGCGC
GGGGCGCTTG AGCTGCCGCT CGTGGTCGGC TTCGGCATCT CCACCCCGGA GCAGGCGGGG
GAGGTGGCCC AGGCGGCCGA CGGCGTGGTG GTGGGAAGCG CGCTGGTGAA GTACTTCGAG
AAGTACCAGG GGGCCGAACT CCTGGAACAG TTGGGGGGCT TCGTCTCGGC GCTAAAACAA
GGAGTGCTGA AGGGGTCCAG GTAG
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| Protein sequence | MSRISDRFAS LKERGEKALV TFVTAGDPDL ATTEKVVLEL ERAGADLVEL GVPFSDPMAD
GPTIQLSSDR ALASGTTLPA ILELVSRLRE KTQVPIVLMG YFNPIFAYGS ERFAFDAAQA
GVDALLVVDL PPEEAAELKG ATDSCGLDLI FLLTPTSDSS RVAMVARQGS GFIYYVSVTG
VTGARSAVAD DLAARVTEVR GALELPLVVG FGISTPEQAG EVAQAADGVV VGSALVKYFE
KYQGAELLEQ LGGFVSALKQ GVLKGSR
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