| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0886 |
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| Symbol | |
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| ID | 8136207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1056873 |
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| End bp | 1059524 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644868502 |
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| Product | hopanoid biosynthesis associated RND transporter like protein HpnN |
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| Protein accession | YP_003020711 |
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| Protein GI | 253699522 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 4.34494e-16 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGAAA CGGCAAAAAG AGGCAGCCTC CTCTTCTCCC TTTCCTCCCG CCGTCCCTGG
CTGGTACTGG TTACGGCTTT GCTGCTGTCG GTGCTTTCCC TGTGGCTCAC CTACCAGCGC
ATGGAGTTCC TGACCGGCAG GGACGACCTG ATGCCGCAGA ACACCGCCTT CAATCGCGAC
TTCCGGGAAT TCCGCGCCGA CTTCGGCGAC ATGGAGGAAA TAGCTGTCGT CATCGAGGGG
AACGACCCCG AGCGGGTGGG CGCCTTCGGC AGCCGGCTTT ACGACACGCT CTCCAAGGAG
ACCAGGTACT TCTCCGACGT TTTCTATCCC TATGCACTCC CCTTTTTCCA GAAAGACGGC
CTGCTCTTCA TGCCGCTTGA GGACATAAAG GAGCTGCGCA AAAACCTCTC CCTTGCCGCG
CCGGCCTTGC AGGCGCTCGC CGCATCCCCG TCGGTGCAGA CGCTCTTCAC GCACCTGACC
CAGAGCATGG AGCGCTGCGT CGCCGGGGAC GAGTCGCAGC TTCCCGGCGT GCTGTTCATG
CTGGAAAAGC TGGGCGCGGG CTTCCAAAGC TTCGGCGGCG GCAAGGGCGC CCCCCCCTCC
ATGGAAACCG TCTTCATGGA TCCGGACTCC TCTTTCGCCA AGGCGGGTAG GCAGCAGATC
CTGACGGCGC TCCCGGTGAG GGACATGCAG GGTTTCGTCC CGGCGGAGGG GGCGATACGA
AAAGTGCGCG CCGAGGTGGC GAGGCTGAAG GCGCTCCCGG AGTTCAAGGG GGTGACGGTC
GGGCTGACGG GCACGCCGGT GCTGGAAAAC GAGGAGATGG CGACGAGCCA AAACGACATA
GCGCTCGCCA CCGCGGTCTC CCTGGTGCTG ACCGTGATCC TGCTGCTGTT GGCCTTTCGC
GGCGTGCTCA ACGTGCTGGC CGCGATGGCT TCCCTGCTGG TGGCTATCTC GCTCTCCTTC
GGCTTCGCCA CGCTCGCCGT CGGGCATCTG AACATCCTCT CCATGGTCTT CGCCGTGATG
CTGATCGGCA TCGGCATCGA GTACGGGATA CAGGTAGTGC TCCGTTACCA GGAGGAGTTG
AACCTGGGCG CGGGGGAACT GCCCGCGATC AAGACCGGAC TGGAAAGAAA CGTCTGGGCC
ATCGTCATGG CCGCGGCGAC GGTGGCGGCG GCCTTCCTCA CCTTCGTACT AACCGATTTC
AAGGGGATAG CGGAGCTCGG CATCATCGCC GCAGGCGGGG TCGCCATCTG CGTCGTCGTC
ACCTTCACCG TACTTCCCGC CATGCTGGTG CTCCTTTCCC GGCACAGAAA GCCGCACGCG
CGGCAAGGGG TGACGCACCT ATCCGAGCAC GGCGTCATGG CGAGGCTCCT CTTCGGCCGT
CCCAAGCTCG TCATCGCGGT CACCGCTTTT TGCTGCGTAG CGTCGCTCTA CCCCCTCTCC
CGCATCGCCT TCGATTACAA CCTGATGAAC CTGCAGGCCG AGGAGCTCGA GTCGGTTACC
TACGCCTACA AGCTGATGAA GAGCAAGGAA AACAGCGGCT ACTTCGCCGT CGTCACAGCG
AAGAACGAGG CCGAGGCGCG GGAGAAAACA GCGCGGCTGG AAGCGCTGCC GACGGTGGAT
CACGTGGTGA GCCTGCACAC CCTGGTGCCG GACCTGCAGC AGGAAAAACT CGCCGAGCTG
GCGGCCGTAA GGCGCGAGCT TGCCGACGTC AAGCCGGTCC CATACGAGGA AGAGCTCTCG
CTCATGGAAC TGCCGACGGT TTTCGAGAAT TTCAGGAACG CCGCGGTAGC ACTCAAGGGG
AAGCTGGAAA AGGAGCGCCG TCCCGAGGCG AAGCAGGTCT CTTCCTTCGT GGACGTACTG
GACAAGTTCT TCGCGGGGCT GGAAAAGGAG CGGGACAAAA ACGCCGTCGG CATGCTGCGG
GACTTCCAGG GGGGGATGTT CCGCGAGCTC CCGCTGAAGA TAGAGGCCCT GAAAAAGAGT
CTGGACGCCT CACCCGTCAC CGAGGCCGAC ATCCCGGCGG AGCTCCGATC GCGATTCGTG
GGGAAGAGCG GCAGACTGAT GCTGCAGGTG GCACCCAAGC GGGAGATCTT CAATCGCGAG
CCGCTCGAGG AGTTCCTGAG CCAGGTGCGT CGCGTCGATC CGCATGCGAC CGGGCAGCCT
GTGATGGTGT ACGAGTCCAT GACCATCATG CGCGACGCCT ACCGGCTCGC CTTCATTTAC
GCCTTCGCCG CCATCGTGGT GATCCTGCTG GTCGCCTTCA GGAGCGTCAA GTTCGCCGCC
ATAGGACTCA TTCCGCTGGT CGTCGGCGTC CTCTTCATGG TGAGCGGCAT GTGGCTTTTC
GGGATCGACT TCAACTCCGC CAACATCATC GTCATGCCTT TGGTGCTGGG GATCGCCGTC
GACTCGGGGA TCTATATCAT CAACCGCTTC CGGCGCGAAG ATGGGAGCGC TGCGGCGGTC
GTTCTGAGCA GCACCGGGGT GGGCGTTCTG CTCAACACCC TCACCATCAT GGCCAGCTTC
GGCGCGCTCA TGGTGGCGCA TCACCAGGGA GTTTTCAGCA TCGGCGCCGT CATGTCGCTG
GGGATGGTCG CCTGCCAGTT GGCCTTCATG GTCACGTTGC CGGCGGTGCT CGCGCTTTCC
GGTAAAAAAT GA
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| Protein sequence | MKETAKRGSL LFSLSSRRPW LVLVTALLLS VLSLWLTYQR MEFLTGRDDL MPQNTAFNRD
FREFRADFGD MEEIAVVIEG NDPERVGAFG SRLYDTLSKE TRYFSDVFYP YALPFFQKDG
LLFMPLEDIK ELRKNLSLAA PALQALAASP SVQTLFTHLT QSMERCVAGD ESQLPGVLFM
LEKLGAGFQS FGGGKGAPPS METVFMDPDS SFAKAGRQQI LTALPVRDMQ GFVPAEGAIR
KVRAEVARLK ALPEFKGVTV GLTGTPVLEN EEMATSQNDI ALATAVSLVL TVILLLLAFR
GVLNVLAAMA SLLVAISLSF GFATLAVGHL NILSMVFAVM LIGIGIEYGI QVVLRYQEEL
NLGAGELPAI KTGLERNVWA IVMAAATVAA AFLTFVLTDF KGIAELGIIA AGGVAICVVV
TFTVLPAMLV LLSRHRKPHA RQGVTHLSEH GVMARLLFGR PKLVIAVTAF CCVASLYPLS
RIAFDYNLMN LQAEELESVT YAYKLMKSKE NSGYFAVVTA KNEAEAREKT ARLEALPTVD
HVVSLHTLVP DLQQEKLAEL AAVRRELADV KPVPYEEELS LMELPTVFEN FRNAAVALKG
KLEKERRPEA KQVSSFVDVL DKFFAGLEKE RDKNAVGMLR DFQGGMFREL PLKIEALKKS
LDASPVTEAD IPAELRSRFV GKSGRLMLQV APKREIFNRE PLEEFLSQVR RVDPHATGQP
VMVYESMTIM RDAYRLAFIY AFAAIVVILL VAFRSVKFAA IGLIPLVVGV LFMVSGMWLF
GIDFNSANII VMPLVLGIAV DSGIYIINRF RREDGSAAAV VLSSTGVGVL LNTLTIMASF
GALMVAHHQG VFSIGAVMSL GMVACQLAFM VTLPAVLALS GKK
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