| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0845 |
|---|
| Symbol | |
|---|
| ID | 8136161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 1001072 |
|---|
| End bp | 1002028 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644868457 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_003020671 |
|---|
| Protein GI | 253699482 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 114 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGACA GGACGAAGGG AGTGGGAGAC CTCCCGCTTG AAAAGATCGC GCTGTTCAGG
CATGTCGCTC CCGAATCGCT GCAGGGAATC ATCGACTGCT GCGAGATCAG GAACCTGAAG
CGCCGGGAGA CGCTGCTGTT TCCGGAGCGG GTCAACCGCG AGCTTTACAT ACTGCTTTCG
GGGCGGCTCA GGATCCATCT GCAAGACCCC GGCTCCGAGC CGATCGCCTA CATCGGTCCG
GGCGAGGTAG CGGGGGAACT CTCCGTCATC GACGGCAACC CCACCTCCGC CTACGTAATC
GCCGATGAAG ACTCAAGCGT CATGGTCATG GAACAGGAGC TGGTATGGTC GCTTGCGACC
GTATCGCACG CCGCGGCTTA CAACCTCCTC ACCATGCTCT CGGGCAGGCT GCGCAACGCC
AACCGCTGCA TCGGCGAGAA GATGCTGCAG GAACATGCCT ATCACAGCTA CGGCACCGTC
GACGCGCTCA CCGGAATGCA CAACCGTTAC TGGCTCGACG AGGCGCTCAC CCGCATGGTG
CACCGTGCCG CCCGCAGCGC ATCTGCGCTC TCCGTGCTGA TGCTGGACAT AGACAATTTC
AAGGAATTCA ACGACACTCA TGGGCATTTG AGCGGCGACC GAGCCATTCA CACCGTCGCC
CAGACCGTAC TGGAGAGCCT GAGGCCGACG GTAATGGCGG CCCGCTATGG AGGCGACGAG
TTCCTGGTGG CCATACCGGA CGTCGCGCTT GAGACCGCCC TGGAGATCGC CGGAAGGCTG
CGGCAGAAAG TCGCGGCCAA AGAGATCCCG CACCACCCCG CCCCCCTGCC GCCGCTCACC
GTTTCCATAG GCGTCGCCGA CGTCGCCCCG GGCCAAAGCG CCGTGGACGT CATCGCCGCA
GCCGACGCCG CACTTTACCG CGCGAAAATG CTGGGCAGGG ATACCGTCTC GCCCTAG
|
|---|
| Protein sequence | MFDRTKGVGD LPLEKIALFR HVAPESLQGI IDCCEIRNLK RRETLLFPER VNRELYILLS
GRLRIHLQDP GSEPIAYIGP GEVAGELSVI DGNPTSAYVI ADEDSSVMVM EQELVWSLAT
VSHAAAYNLL TMLSGRLRNA NRCIGEKMLQ EHAYHSYGTV DALTGMHNRY WLDEALTRMV
HRAARSASAL SVLMLDIDNF KEFNDTHGHL SGDRAIHTVA QTVLESLRPT VMAARYGGDE
FLVAIPDVAL ETALEIAGRL RQKVAAKEIP HHPAPLPPLT VSIGVADVAP GQSAVDVIAA
ADAALYRAKM LGRDTVSP
|
|---|
| |