Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0830 |
Symbol | |
ID | 8136146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 985813 |
End bp | 986985 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644868444 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003020658 |
Protein GI | 253699469 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 99 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTGC CGCGAGCCTT GGCGCAAAAG AAAAAATATC TGATCTGGAT CATCGTGGTC ACAGCGGCAG TCATCGCGCT CAACAAGACG CTCCTGGCGC CGCCGCGGGT CAAGACGGTA GCCATCCAGA AGCGCGATCT CGTCTCGCAG GTCTATGGCA ACGGCACAGT CGAGGCGAAG GTTGTCGTCG GCATTTCCAG CAAGATAACC GGCAGAATCG CTGAGCTCTA CGCCGACCAG GGTGATCGGG TGAAAAAGGG GGAGCTTCTG GCCAGGCTGG AAAACGAAGA CCTGCTCCAC CAACAGCAGC AGTCTGAAGC GGGACTCAAC AGGTCAGCCG CCGGCCTCGT CGCTGAACAG GCCAATCTCC AGAAGGCGAA AGCGAACTTG GCCCTGGCGG AAAAAAATGC CCGGCGTTTC AGGTCCCTCG CCGCGAAGGA GATGGTCTCC AGGCTCGAGT CCGAACAGTA CGACACCGCT TTCCTTCTGG CACGGGAGGA AGTTTCCCGC AGCCAGGCCT CCATCGAAGC CATTAAGATG GAACAACGGG CCAATCGCGC CAATCTTGGA TACGCGCGGA GCAAGGTCAA CGACGCGCTG ATTTACGCCC CGCAGGACGG CGTCATTATC ACCAGGGACC TGGAAAAAGG GGCTACGCTT ACGGCCGGGA TGTCCATCTT TACCCTCGCC GACCCTGCTG CAGTCTGGGT CAAGGCCAAT GTCGACGAGT CGCAGCTCAA AGGGGTCACG GTCGGGAAGA AGGCTGCCAT TTTGCTTCGC TCCGCTCCCG GCGAGCAGTT TCCGGGGCAG GTAGCCCGCT TGGGACAGCA AAGCGACAGG GTAACCGAGG AACTGGAAGT GGATGTGGCC TTCACCCCAC CGTTGGAAAG CTTCCGCCTT GGCGAGCAGT CGGAGGTTTA CATCACCACC GGAATGAAAA AGAACGCTCC GGCACTCCCC TCCCTTTCCA TCGTTACCAG AGATAAAAAG CGCGGCGTCT GGACCGTTGC CGGCGGGAGG CTCGCTTTCA AGGCTGTCAC CACAGGAATA GAGGATCGCG GCAATTTTAC CGAAATCGTC CAGGGGCTTG ACCCAAGTGA TCAGGTTGTC GTGGCGACGC CCCAGGAGAT GGGGAGGTTC CGCCAGGGGA TGAAAGTCAG GAGCGGACGA TGA
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Protein sequence | MNVPRALAQK KKYLIWIIVV TAAVIALNKT LLAPPRVKTV AIQKRDLVSQ VYGNGTVEAK VVVGISSKIT GRIAELYADQ GDRVKKGELL ARLENEDLLH QQQQSEAGLN RSAAGLVAEQ ANLQKAKANL ALAEKNARRF RSLAAKEMVS RLESEQYDTA FLLAREEVSR SQASIEAIKM EQRANRANLG YARSKVNDAL IYAPQDGVII TRDLEKGATL TAGMSIFTLA DPAAVWVKAN VDESQLKGVT VGKKAAILLR SAPGEQFPGQ VARLGQQSDR VTEELEVDVA FTPPLESFRL GEQSEVYITT GMKKNAPALP SLSIVTRDKK RGVWTVAGGR LAFKAVTTGI EDRGNFTEIV QGLDPSDQVV VATPQEMGRF RQGMKVRSGR
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