Gene GM21_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0828 
Symbol 
ID8136144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand- 
Start bp983924 
End bp984610 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content57% 
IMG OID644868442 
ProductABC transporter related 
Protein accessionYP_003020656 
Protein GI253699467 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGCAG TCGAAGTGGA AAATCTGACC AAGATCTATG GCAAAGGAAG CACAGCGGTC 
ACCGCCATAG CCGACGCGAC CTTGCGTGTT GAGCCGGGGG AACTGGTAGC GATCCTGGGC 
CCGTCGGGAT CGGGAAAGAC GACGCTGCTC ACATCAATCG GCCTGATCAC CGAGCCTACC 
CACGGCAAGG TCATCATAGA CGGGGTCATG GTCGCCGATG AAGGTTGGCA GCCAGGGCTC 
GACCTCAAGC GTATGCGCCG GGAAAAACTG GGATTCATCT TTCAGGCGCA CAACCTCATC 
CCGTTTCTCA CCGCTTTGGA AAATGTGATG GTGGCGCTGG AGCTCAACAA TCAGCCAAAG 
AAAGAAGCGA AAAGGCGCGC CGAGGAGCTC CTGGTTTCGC TGAACCTGGG ACACCGGTTC 
AACAACTACC CTTCAGGGCT GTCCGGCGGC GAAGCTCAGC GGGTTGCCAT TGCCCGCGCG 
TTGGCAAACA AGCCCAAGGT CATTTTGGCC GATGAGCCGA CTGCGGCATT GGATACCGAG 
AACGGCAAAA ATGTCATGTC CTTGCTCAAG ACACTGGCCG TGGAAAACCA TTCGGCCATT 
CTTGTCGTCA CCCACGACCA TCGAATGGTG GAAGGTTTCG ACCGGATTTT CCACGTCAAC 
GACGGCCGGA TAGCTTTCCC GCCTTGA
 
Protein sequence
MYAVEVENLT KIYGKGSTAV TAIADATLRV EPGELVAILG PSGSGKTTLL TSIGLITEPT 
HGKVIIDGVM VADEGWQPGL DLKRMRREKL GFIFQAHNLI PFLTALENVM VALELNNQPK 
KEAKRRAEEL LVSLNLGHRF NNYPSGLSGG EAQRVAIARA LANKPKVILA DEPTAALDTE 
NGKNVMSLLK TLAVENHSAI LVVTHDHRMV EGFDRIFHVN DGRIAFPP