Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0663 |
Symbol | |
ID | 8135978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 797445 |
End bp | 798101 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644868280 |
Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
Protein accession | YP_003020495 |
Protein GI | 253699306 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 2.8085999999999997e-26 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGACGG CAAGGGTGAA GGGTGAAAAA ACAGATTACC GGATCGGCAA GATCCTCTGT ATCGGCCGCA ACTACGCCGA CCATATAAAG GAGCTCGGGA ACGAGACGCC GGAGCGCCCG GTGATCTTCA TGAAGCCGGC CTCGAGCGTC ATCGGCGAAG GGGAAGAGAT CGTCGTCCCC CCCTACTCCA GCGACTGCCA CCACGAGGCG GAGCTGGCGC TTCTGATCGG CACCGGCGGG AGCAATATCC CCCCCGGGGA GGCGTTAGGC CACTTGGCCG GCTACGGCGT CGCCATCGAC CTGACCCTCA GGGACGTGCA GGCGCAGCAG AAGGAAAAGG GGCTCCCCTG GGAGATCGCC AAGGGGTTCG ACACCGCCTG TCCCCTCTCC GACTTCGTGC CGGCAGCTGC GGTGGCCGAC CCGCAGTCGC TCACCATCAC CTTAAGCGTC AACGGGGTGA AGCGACAGGA CGGCTCGACC GGCCTCATGA TCCACCGCAT CCCGGAGCTC ATCGCCTACC TCTCCTCCAT CTTCACCCTG GAGCCGGGCG ACCTGGTGCT GACCGGCACC CCGGCCGGCG TCGGCCCGAT AAAAAGCGGG GACAGCGTCG TCGCCGAGAT TACGGAAGTG GGGAGACTGC AGGTCTCGGT CAAATAA
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Protein sequence | MKTARVKGEK TDYRIGKILC IGRNYADHIK ELGNETPERP VIFMKPASSV IGEGEEIVVP PYSSDCHHEA ELALLIGTGG SNIPPGEALG HLAGYGVAID LTLRDVQAQQ KEKGLPWEIA KGFDTACPLS DFVPAAAVAD PQSLTITLSV NGVKRQDGST GLMIHRIPEL IAYLSSIFTL EPGDLVLTGT PAGVGPIKSG DSVVAEITEV GRLQVSVK
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