Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0593 |
Symbol | |
ID | 8135908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 725419 |
End bp | 726753 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644868210 |
Product | penicillin-binding protein transpeptidase |
Protein accession | YP_003020425 |
Protein GI | 253699236 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.000288758 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAAGATT TCAAAGACAT AGACAAACAA ATCCGAAGCA AGAGATCCGG CAGGGCCAAG CGACTGGAAG GGCGCAACGC CTTCAAGAAG ATCCAGGGCG AGGACAAGCC GCGCAAGAAG CGGTACGGCA TCGTCTTGGG GGTCATCGCG GCACTGCTAG CCTCCTACCC GATCATCTCC CTGTTGAACT CCTCACCCGC AAAAACGGCC ACTTCGACTG CCGCGGCTGA AACGGTCTCC TTGAAGAATC TGGACCAGGG GAGCGCCTTC CGCCTTGCGG CGGAGGCCTA CCCGAAGGCC CAGCCGCAAG GGGGATCCTA CGTGGCTCCC CTGCCGCAAG GGGGGCAGGT GGTGTATGCC ATCAACGAGG ACGTGCAGAA ACGGGTAGAA AAGGTGCTGG CCGACTACAA GGTCCCCTAC GGGCTGTTCG TAGCCATGGA ACCGAGAACC GGGCGCATCC TCGCCACGGT CTCCCATTCC TCGGTCGAGC CGGGGTGGGA AAAGGACGGT AACTACCACC TCTACCCGCT CGCCTCGCTC TTCAAGATCG TCACAGCCAC CGCCGCGCTG GAAAGCAAGA AGGTAACCCC GGACACCCTC TTCGCCTTCA ACGGCCGGCT CACCTCGGAA AGCCCCAAGT ATTGGCGGGT GCACCCCGGG CGCGGCAACC AGCAGATGCC GCTCTCCATC GCCATGGGTA AATCGGTGAA CCCCGTGTAC GGCAGGCTGG CCGGAGAAGT GGTGGGACGC GATCCGCTCT TGTTGTACGC CGGACGGTAC GGATTCAACG AGGCGCTGCT TCCGGGCTCA CCGATAAAGT CCAGCACCGC TCCCGTGCCG GCCAGCGTAG ACGAGCTGAT GCGGATGGGA GCGGGTCTGA ATCGTGAAGT GAAGGCGTCT CCCTTCCACG CCGCCGCCAT GATGGCCGCG GTCGCCAACG GCGGCGTCAT GATGGCCCCG GGTTTCGCAA CGGAGATACG CGACGCAAAG GGGAACCTGG TGTTCACGCA CAAGCCGCAG GCGCTGAGGA CCGTGATGAC GCCGGAAACC GCTTCATCCA TGGCGCGCAT GCTCGCGACC ACCGTGCAAA GCGGCACCTC GCGCCGGGCC TTCCACGACA GGAGGGGGAG AAGGATGCTC GCCTCGGTCA GCATAGCGGC AAAGACCGGC TCCATCGACG GGACCGATCC CGCCGGCCAT TACAGCTGGT TTGCTGCCTA CGCGCCCATG GAGGACCCGC AGATCGCATT GGCGGCGCTG GTGGTGAACG GTAACAAGTG GCGCATCAAG GCGACCTCGG TCGGCGAGCA GGCGCTGGAG GCGTTCTTCA GGTAG
|
Protein sequence | MQDFKDIDKQ IRSKRSGRAK RLEGRNAFKK IQGEDKPRKK RYGIVLGVIA ALLASYPIIS LLNSSPAKTA TSTAAAETVS LKNLDQGSAF RLAAEAYPKA QPQGGSYVAP LPQGGQVVYA INEDVQKRVE KVLADYKVPY GLFVAMEPRT GRILATVSHS SVEPGWEKDG NYHLYPLASL FKIVTATAAL ESKKVTPDTL FAFNGRLTSE SPKYWRVHPG RGNQQMPLSI AMGKSVNPVY GRLAGEVVGR DPLLLYAGRY GFNEALLPGS PIKSSTAPVP ASVDELMRMG AGLNREVKAS PFHAAAMMAA VANGGVMMAP GFATEIRDAK GNLVFTHKPQ ALRTVMTPET ASSMARMLAT TVQSGTSRRA FHDRRGRRML ASVSIAAKTG SIDGTDPAGH YSWFAAYAPM EDPQIALAAL VVNGNKWRIK ATSVGEQALE AFFR
|
| |