Gene GM21_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0571 
Symbol 
ID8135886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand- 
Start bp696389 
End bp696802 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content57% 
IMG OID644868188 
Productmethylmalonyl-CoA epimerase 
Protein accessionYP_003020403 
Protein GI253699214 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR03081] methylmalonyl-CoA epimerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value3.82853e-18 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTATCTA AGATAAATCA CATCGGAGTT GCAGTCGCTT CTCTTGAGGA AGCCCTTCCT 
TTTTATCGCG ATTCACTGGG CATGGCTTTC TCTGGTACAG AAGAGGTCCC CAGTCAACTA 
GTACGTGTAG CTTTTCTGTC AGTAGGTGAA TCGAAGATTG AACTTCTGGA GCCGACCTCC 
CCCGACAGCC CCGTGGCCAA GTTCCTGGAG AAGAACGGCC CCGGGGTGCA CCACGTGGCT 
TACGGGGTCG ACGACATCGA GGCGGCCATC GCGGCGCTGG TGGCCAAGGG TACCCGCATG 
ATCGATGCTG TTGCCCGACC CGGCGCACAT GGTGCCCGGA TCGCATTCAT CCACCCCAAA 
AGCAGCGGCG GCGTACTGAC GGAACTGTGT GAAGTGCACG ACCACAGTCA TTAA
 
Protein sequence
MLSKINHIGV AVASLEEALP FYRDSLGMAF SGTEEVPSQL VRVAFLSVGE SKIELLEPTS 
PDSPVAKFLE KNGPGVHHVA YGVDDIEAAI AALVAKGTRM IDAVARPGAH GARIAFIHPK 
SSGGVLTELC EVHDHSH