Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0560 |
Symbol | |
ID | 8135871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 685161 |
End bp | 686834 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644868173 |
Product | Radical SAM domain protein |
Protein accession | YP_003020392 |
Protein GI | 253699203 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 4.12594e-30 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCACGCA AAAACATTGA GAAAAGACGC ACCCTTCTAG CCGGCGAGAG CGGCGGGCAG CACAGAAACA GCGGCGGCAG GCTTTCCTGC TGTCTGGTCT ACCCCAACCG CTACCACTCC GCCATGAGCA ACCTGGGCTT CCAGGCCGTC CAGGCCATGA TGAACGCGCA CCCTGAGGTG ATCTGCGAGC GCGCTTTCCT GCCGGAGCGC GACGAGCTGG CGGAACTGGA GCGGACCGGG GGGACGCTCC TCTCCCTGGA GGGGCAGCGC CCGCTCTCCT CCTTCGACCT CGTCGCCTTC TCCGTTTCCT TTGAAAGCGA TTACCTTAAC CTCCCCACGA TCTTCAGGCT CTCCGGGATG AGCCCCTGGG CCGCCGAGCG TTCGGCGCGT GAGCCGCTTG TTCTGGCAGG GGGGGCGGCG CTCTTTTTAA ACCCCGAGCC GGTCGCCCCC TTCATCGACC TGGTCTGCAT CGGCGAGGCG GAACCGATCC TCCCGCACCT GCTGGAACTG CTGAAGGACG GGGGGCGCTC CCGCGCCGAG CTTTTGTTGC AGGCCTGCCG TCTCCCCGGA ATCTACGTCC CGTCGCTGTA CCAGCCGCAG TATGATGCCG GCCGCTTCAG TGGGCTGCGG CCGCTTCCTG GGGCGCCGGC CAAGGTGCGC CGCGTCTGGG AAAAGGAGCT CGATCGAAGG CAGACGGTGA CCGAGATCCA CACCGACGCC ACCGAGTTTT CCGGCATGCA TCTGGTCGAG CTTTCCCGTG GCTGCCCTCG TGCCTGCCGC TTCTGCGCAG CCGGCTTCAT CTACCTCCCC TACCGCAGCC GTTCCCTGGA GGGAGTAAGG GAGGAGGTGT TGAAAGGGGT GGCGCAGGGA AGAAAGGTGG GACTGGTCGC CGCTGCCGTC TCTGATTACT CCGGCATCGG GGCATTGTGC GGCGAGATCG TTGCGGCGGG CGGGAAGTTC TCGGTCTCCT CCTTCCGCAT CGACCACCTC GACGCCGGGA TGATCGAGGC GCTCAAGGCC AGCGGGCAAA AGAGCGTGGC GCTGGCGCCG GAGGGGGGAA GCCAAAGGCT GCGCGACCTG GTGAAAAAGG GGATTGACGA GGAGCAGATC CTGGCGGCTT GCGACACGCT GATCAGCCAT GACATCCTCA ACCTGAAGCT CTATTTCATC ATAGGACTCC CCACCGAGAC GGAGCAGGAC CTGGAGGAGT TGGTCCTGTT GGTGACGCGG ATCAGGGAGA GGGTGCTGGC GGCGGCCAAA AAGAACAAGC GTCTGGGGGA GGTGCAGCTC TCGGTGAACC CGTTCATCCC CAAGCCCTTC ACCCCCTTCC AGTGGTGCGG CATGGAGCCT GTCAAGTCGC TTGAGTCGAA GTGGAAGTAC CTGCAGAAGG CGCTGGGAAA GCTGTCCAAC CTGAAGCTGC AGATGGAGAG CCCGAGGGAG GCTTACCAGC AGGCGCTTTT GTCGCGGGGG GACCGCAGAC TCGCGCAACT GCTGGTCCTC GCGGACCGCA CGGGGAGCTG GAAGCAGGCG CTACGCGAGG TGGAACTAGA TTGCGACGCC GAAGTCCACC GTCAAGTGGA GCTGGACGAG CCGCTGCCGT GGGATTTCAT CGATGGCGGC GACTGCGAGA GGCTGAAGCG GGAATACCGC AAGGCTTTCG AGGAAGGGGC TTAA
|
Protein sequence | MSRKNIEKRR TLLAGESGGQ HRNSGGRLSC CLVYPNRYHS AMSNLGFQAV QAMMNAHPEV ICERAFLPER DELAELERTG GTLLSLEGQR PLSSFDLVAF SVSFESDYLN LPTIFRLSGM SPWAAERSAR EPLVLAGGAA LFLNPEPVAP FIDLVCIGEA EPILPHLLEL LKDGGRSRAE LLLQACRLPG IYVPSLYQPQ YDAGRFSGLR PLPGAPAKVR RVWEKELDRR QTVTEIHTDA TEFSGMHLVE LSRGCPRACR FCAAGFIYLP YRSRSLEGVR EEVLKGVAQG RKVGLVAAAV SDYSGIGALC GEIVAAGGKF SVSSFRIDHL DAGMIEALKA SGQKSVALAP EGGSQRLRDL VKKGIDEEQI LAACDTLISH DILNLKLYFI IGLPTETEQD LEELVLLVTR IRERVLAAAK KNKRLGEVQL SVNPFIPKPF TPFQWCGMEP VKSLESKWKY LQKALGKLSN LKLQMESPRE AYQQALLSRG DRRLAQLLVL ADRTGSWKQA LREVELDCDA EVHRQVELDE PLPWDFIDGG DCERLKREYR KAFEEGA
|
| |