| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0549 |
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| Symbol | |
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| ID | 8135860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 671045 |
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| End bp | 673183 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644868162 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003020381 |
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| Protein GI | 253699192 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.338238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTAA TTAACCCCAA TGGAAATGAC CACCCCCCCG GTCCTTCCGA GAATAGCGTT
ACCGCGACCG GTGCCGACGA GCCGGCCGGC AGGAAGGGAC GCAGGAACCT GAACAGGTGG
CTCCTGGCCG GGCTCCTTCC GCTTGCAGCT TTGGCGCTGC AATGGCTTTT ATGGGAAAGA
CTGCAGCCCT ACGTCTGGCT ATTCTTCTAC CCTGCCGTTT TCTTAAGTTC CTGGGTGGGA
GGTAGGGTCG CAGGGCTTTT GGCTACGGCA TTTTCGGCTG TCGTCGTGTG GTATCTCTTC
ATCCCCCCCC GCTACAGTTT CTCTCTGGTT CACCCCTCGA CGATCATCGC GCTGCTCATC
TTCGCGGGCA TGGGCGTCCT ATTCTCCCTG TTCCACGAAC GGCTGAGAAG AGCGGGCCGG
CAGACCCGGC TGGCGCTGGC GGAGGCTATC TTGGGACGGG AACACCTTGA GCATCTGATG
GAGGAGCGGA CACGCGAACT GGTGAGCCTG GTCGACGAGT TGCGGCGCAA GGAGGCGGAC
CTACGGAGGT CCCAGGAGCT GGCCAAGATC GGCAGCTGGA CCTACCAGGC AGACGGGAGG
CTTGAGTGGT CGGACGAGCT TTACCGCATC TACGGCCTGG CTCGCGGGAA ATTCACACCG
GACGTTCCAT CCTTTCTTGA GATCATCCAC CCGGATGACC GCGCTCACAT GCAGCATTGG
GTTAAGGCCT GCCTGGGAGG GGAGAACCCC GGCGAGTTGG AGTTCCGGAT CGTTCGTCCC
GACGGGAGCG TGCGCTTCAT CAGCGGCCAC GGCGCTCTGA GCCGCGATAG CGAGGGGCGA
GTCACCGGCA TGTCGGGGAC CGGCCAGGAC ATAACCGAGC GGAAAATCGC TGAGTCCGCG
CACCGGGAGA GCGAAGAGCT GCTGAAGCTT TTCATCGAAT ACGCGCCGGT GCCGCTTGCC
ATGTTCGACC GCGAGATGCG TTACCTCTAC GCGAGCCGGC GCTGGCGCAG CGATTTCGGG
TTGGGAGACC GTTCCCTCGT CAAGGTCAGT CACTACGCCA TATTCCCGGA GATCCCGCAG
CACTGGAGGG AGCTGCACCG GCGCGGACTC GCCGGAGAGA TCCTGCGCGA GGAGGCCGAA
GAATTCCGGC GCGCCGACGG CACGGTCCAG TGGCTGCGCT GGGAACTCCG CCCCTGGTAC
GACGCCGGGG GGAAGGTGGG GGGAATCGTC ATCTTCAGCG AGGACATCTC CAACAGAAAA
TGCGCCGAGG ACGCGCTGCA AAAACTCAAC GAGGAGCTGG AACTGCGCGT GGCCCAGCGG
ACCGAGACGC TGGACGTGAT CTTAAGCGAG CGGGAAGCGC AGAATGCGGA GCTGCAGCGC
GCCTATCACG AGCTCGAGGC GGAGACGGCG CGGCGTATCC GCATGGTGGA GGAACTGCGG
CAAAAGGAGC AGTTGCTGAT CCATCAAAGC CGGCTCGCGG CCATGGGGGA GATGCTCGGT
TACATCGCGC ACCAGTGGCG CCAGCCGCTG AACGTCCTCG GGCTGCACCT GCAGGTGCTG
GGGCTTTCCT ACCAGCACGG GACCTTCAGC CGGGAACTCC TGGAGGAGAG CGTGGGAAAA
GCGATGGGCA TCATAAGGCA CCTCTCCAGG ACCATCGACG ACTTCCGCGA CTTCCTGATC
CTCAACAAGG AGAAGACCCT GTTCCAGGTC GACGAGGTGA TCGTAAAGAC GGTCGGGCTC
ATCGAGGAGC ATCTCAAGAA GGCGGGGGTC CGCATCGAGG TCGCCTGCAC CAACCCGCCG
GAGGTGAACG GCTTTCCCAA TGAATACAGC CACGTGATTC TGAACCTTTT GACCAATGCG
AAGGACGCCT TTTTGGAGCG TCAGACGGAG CATCCGGTGA TCAGGGTGCA TTCGGGGTCC
GAACAGGGGA AGACGGTGGT GACCATCGCC GACAACGCCG GGGGGATCCC GGAAGAGATA
ATCGACAAGA TCTTCGACGC CTACTTCACC ACCAAGGGGT TGGGAAAAGG AAGCGGGGTC
GGCCTGTTCA TGTCCAAGAT GATCATCGAG AAAAACATGG GGGGCAGCCT CACCGTTCGC
AACGTCAACG GCGGCGCCGA ATTCAGGATC GAGATCTGA
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| Protein sequence | MQLINPNGND HPPGPSENSV TATGADEPAG RKGRRNLNRW LLAGLLPLAA LALQWLLWER
LQPYVWLFFY PAVFLSSWVG GRVAGLLATA FSAVVVWYLF IPPRYSFSLV HPSTIIALLI
FAGMGVLFSL FHERLRRAGR QTRLALAEAI LGREHLEHLM EERTRELVSL VDELRRKEAD
LRRSQELAKI GSWTYQADGR LEWSDELYRI YGLARGKFTP DVPSFLEIIH PDDRAHMQHW
VKACLGGENP GELEFRIVRP DGSVRFISGH GALSRDSEGR VTGMSGTGQD ITERKIAESA
HRESEELLKL FIEYAPVPLA MFDREMRYLY ASRRWRSDFG LGDRSLVKVS HYAIFPEIPQ
HWRELHRRGL AGEILREEAE EFRRADGTVQ WLRWELRPWY DAGGKVGGIV IFSEDISNRK
CAEDALQKLN EELELRVAQR TETLDVILSE REAQNAELQR AYHELEAETA RRIRMVEELR
QKEQLLIHQS RLAAMGEMLG YIAHQWRQPL NVLGLHLQVL GLSYQHGTFS RELLEESVGK
AMGIIRHLSR TIDDFRDFLI LNKEKTLFQV DEVIVKTVGL IEEHLKKAGV RIEVACTNPP
EVNGFPNEYS HVILNLLTNA KDAFLERQTE HPVIRVHSGS EQGKTVVTIA DNAGGIPEEI
IDKIFDAYFT TKGLGKGSGV GLFMSKMIIE KNMGGSLTVR NVNGGAEFRI EI
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