Gene GM21_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0543 
Symbol 
ID8135854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp665923 
End bp666729 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content64% 
IMG OID644868159 
Productcollagen triple helix repeat protein 
Protein accessionYP_003020378 
Protein GI253699189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGCG TGAGAAGGGC GTTATTTACA GCGATAGCCA TGGCAGGCGT GATGGGATTG 
ACAACAGGCA CAGGCTACGC CGGCACCAAG TATTCGGATA CGCATGACAA AGCCGGGGCC
AAGACGCACC AAAAAACAAT GACGCACAAA GCAGGCAGCG CCAGAGGGAC GGCCGGTGGT
GGCCTGACGC AATCGACAAT GCCAAGTGGT GTGGGAGCAC ATTCCACTAC CAGGCAGGAT
TTCACCGTGG AAAAAGTGGG GCCGGAAATG GGTAGCGGAG GCACAATGGG TACCGGTGCC
GGCGGAGACG TCGGTACCGG AACCATGCAG AGGGGGACCG GCGGCACCCA TGACCAAGGT
ACCGGCGGCA CCATGCAGAG AGGAACCGGC GGAACCTATG ACCAGGGTAC CGGCGGCACC
ATGCAGAGAG GAACCGGCGG CACCTATGAC CAGGGTACCG GAGGAACCAT GCAGAGGGGC
ACCGGCGGAA CCTATGACCA GGGTACCGGC GGCACCATGC AGAGAGGCAC CGGCGGAACC
TATGACCAGG GTACCGGCGG AACCATGCAG AGGGGCACCG GCGGCACCTA TGACCAGGGT
ACCGGCGGCA CTATGGAGAG AGGAACCGGA ACATACGATC AGGGGACAGG TAGCATGGGC
ACCGGCGGAA CAACCGGCAC CGGCAGCGGC GGCAGCATGG GCACCGGCGG AACAACCGGC
ACCGGCACCG GCAGCGGCGG CAGCATGGGC ACCGGCGGGA CGACCGGCAC CGGCAGCGGC
GGCGGCACGG GTTCTGGCGG AAGGTAA
 
Protein sequence
MRSVRRALFT AIAMAGVMGL TTGTGYAGTK YSDTHDKAGA KTHQKTMTHK AGSARGTAGG 
GLTQSTMPSG VGAHSTTRQD FTVEKVGPEM GSGGTMGTGA GGDVGTGTMQ RGTGGTHDQG
TGGTMQRGTG GTYDQGTGGT MQRGTGGTYD QGTGGTMQRG TGGTYDQGTG GTMQRGTGGT
YDQGTGGTMQ RGTGGTYDQG TGGTMERGTG TYDQGTGSMG TGGTTGTGSG GSMGTGGTTG
TGTGSGGSMG TGGTTGTGSG GGTGSGGR