Gene GM21_0527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0527 
Symbol 
ID8135838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp648053 
End bp649009 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content61% 
IMG OID644868144 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003020363 
Protein GI253699174 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones112 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACGC CTTCGGTGGC CGTCGTTGCT TTTGACCGTT TCAGTCCCTT TCATCTGTCG 
GTGCCCTGCT TGATTTTCGG CAGCATCCTG CCGGGGCACT TGCTGTTCGA TCTGAAGGTC
TGCACCGCCG CCCCCGGCCC AGTCCACTCC GATCATGGGT TGCAACTCAA TGCCGCACAT
GGCGTTGAAG CATTAGCGGA GGCCGATATC GTGGTGGTTC CGGGGTGGAG CGATCCGGCG
GTCCCGCCTT CTGCCGCGCT GACGGAAGCG TTGCGCGCGG CTCATGCCCG TGGAGCGCAA
GTGGTAGGGT TGTGTCTGGG GACTTACGTG TTGGCGTATG CGGGACTGCT CAATGGACAA
AGAGCGGCGA CACACTGGGA ATACGAACAG GACTTCGTAT CACGCTTTCC AGAGGTTCGA
CTGGACATGA ACGTTCTTTA CGTGGATGAC AACCGCCTGA TCACCTCGGC TGGTACGGCT
GCTAGCATGG ACTGCTGCCT TTACCTGATG CGCCAGCACC ATGGCAGCGC CATCGCCAAC
AAGATCGCGC GGCGCGTGCT GGTGCCTACC CATCGCGACG GCGGGCAGGC ACAGTTCATC
GAGAAGCCGC TACCTGTTTC CACCAACGAC GCGCGCATCA ACGGTTTGTT GAGCCACCTG
CGCCAGAGCC TCCAGGCCCA GTACTCTCTG GACGACCTTG CTAAGCGTGC CGCCGTGAGC
CGCCGCACGC TGACACGAAG CTTCCAAAAG GCCACCGGGA TGTCCATTGG GGAGTGGCTG
CTCGCAGAGC GCCTGCGGCA CACACAGGAA CTGCTGGAAG CGACTTCGCA ACCGATCGAA
CTGATTGCCG AGCTTGCGGG CTTTGGCACA GCCAGGTCAC TACGCCAGCA ATTCAAGGGC
GCGTTCGGCG TCTCCCCAGG TGAATGGCGC CGGAGTTTTC GCAATTCAAG ATCCTGA
 
Protein sequence
MPTPSVAVVA FDRFSPFHLS VPCLIFGSIL PGHLLFDLKV CTAAPGPVHS DHGLQLNAAH 
GVEALAEADI VVVPGWSDPA VPPSAALTEA LRAAHARGAQ VVGLCLGTYV LAYAGLLNGQ
RAATHWEYEQ DFVSRFPEVR LDMNVLYVDD NRLITSAGTA ASMDCCLYLM RQHHGSAIAN
KIARRVLVPT HRDGGQAQFI EKPLPVSTND ARINGLLSHL RQSLQAQYSL DDLAKRAAVS
RRTLTRSFQK ATGMSIGEWL LAERLRHTQE LLEATSQPIE LIAELAGFGT ARSLRQQFKG
AFGVSPGEWR RSFRNSRS