| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0493 |
|---|
| Symbol | |
|---|
| ID | 8135802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 607520 |
|---|
| End bp | 608815 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644868111 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor |
|---|
| Protein accession | YP_003020331 |
|---|
| Protein GI | 253699142 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.000431095 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGAC TGCTCAGAGT ATTGATGGTA GAAGACGCCC CTGACGATGC GCAGCTCATC
GTGATCCGCC TGGAACAGGG AGGTTTCGAC GTCCAGTTCC AGCGTGTCGA CAGCGCCCAG
GCCATGTGCG ACGCCTTGGA AGGCTCCCAG TGGGACGTCA TCATCTGCGA CTACGTCATG
CCCGGCTTCA GCGGGCTGCA GGCGCTGAAA ATCCTCAAGG AGAAAGGGAC CGACATCCCC
TTCCTGATGA TCTCCGGCAA GGTCGGTGAA GAGGCCGCAG CCGAGGCCAT GCGTTGCGGC
GCCGACGCCT TCCTGCTCAA GGGGAACCTC ACCGGGTTGG TCCCAGCCGT GCAGCGGGGG
ATCGCCGATG CGGCACTGCG CGAACAAAAC CGCCGCCACG AACAGGAGCT CAAGGACAAG
CTTACCTTTA TCCAGGTACT GATCGACACC ATCCCCACAC CCATCTTCTA CAACGACCCC
AACGGCCTTT ACCTGGGTTG CAACAAGGCC TTCGAGGAGC AGATCGGGAT GAAGAGGGGG
GAGAACATCA ACAAGAGCAT CTACGACATC CTCCCCCCGG ACCTGGCAAC ACTGTACACG
AGGGGGGAAG AGGTGGCGGA AAAAGGTAGC GGCCCCCGCA GCTTCGAGGG GACGATCACC
TGCGCCGACG GCGAAGAGCG CGACGTCATT TTCTACAGCG CTTCCTTCAG CAACTCGGGG
TCCACAAGCG GCGGCGTGGT CGGCGCGCTG CTCGACATTT CCGAGAGAAA ACGCGCCGAA
ACCAAGCTCC GCTACTTGAG CACCCACGAC ATGCTTACCG GCATCTACAA CCGCGCCTAT
TTCGACGAGG AACTGGAGCG CCTGAAGAAG GGGCGCAAGT TCCCGGTCAG CATCGTCATG
GCGGACGTGG ACTGCCTCAA GGAGGCCAAC GACCGGTACG GCCACGCGGC GGGGGACGAG
CTGCTGAAAC AAGCTGCCGA GGTGTTGAAG AGCGCTTTCA GGAGGGAGGA CGTGGCGGCG
CGCGTTGGAG GCGACGAGTT TGCGGCGCTG CTCCCCAATA CCGACGAGGC GGCCCTGGTC
GAGGCGATGG AGCGGCTGCA GCAGCAACTG CAGCTAAGCA ACAAGGAACA CCATGGTTTC
CCCCTCCCCT TAAGCCTCTC GATAGGGGCG GCGACCGCCT TAAACGGCGA GGAGCTCTCC
GCCGCCTGGC GCGTTGCGGA CCAGAGGATG TACCGGGAGA AAAAAGGACG CTGCGCCAGC
ATCCCGCAGT TCAGACAGCG CCACATCAGC GTCTGA
|
|---|
| Protein sequence | MERLLRVLMV EDAPDDAQLI VIRLEQGGFD VQFQRVDSAQ AMCDALEGSQ WDVIICDYVM
PGFSGLQALK ILKEKGTDIP FLMISGKVGE EAAAEAMRCG ADAFLLKGNL TGLVPAVQRG
IADAALREQN RRHEQELKDK LTFIQVLIDT IPTPIFYNDP NGLYLGCNKA FEEQIGMKRG
ENINKSIYDI LPPDLATLYT RGEEVAEKGS GPRSFEGTIT CADGEERDVI FYSASFSNSG
STSGGVVGAL LDISERKRAE TKLRYLSTHD MLTGIYNRAY FDEELERLKK GRKFPVSIVM
ADVDCLKEAN DRYGHAAGDE LLKQAAEVLK SAFRREDVAA RVGGDEFAAL LPNTDEAALV
EAMERLQQQL QLSNKEHHGF PLPLSLSIGA ATALNGEELS AAWRVADQRM YREKKGRCAS
IPQFRQRHIS V
|
|---|
| |