| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0489 |
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| Symbol | |
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| ID | 8135798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 602459 |
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| End bp | 603922 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644868107 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003020327 |
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| Protein GI | 253699138 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.0000000573639 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAAAA CGACCCTTAT CATACTGTCA CTGTTGTTCT CCACCACCGC TTTCGCCGCG
TCGGCCGGTA CGGCCGCCGA ACAGCGCGAA CAGCGCGACC TGGCCCGGGC CATGCAGGTC
GCCTACAACT CCTCCGACGT CGCGCTCTCC AAAGGGCTCG GCCTCACCCC CTCGGATTTT
TCCGACGACG AAGATTTCAG CGACGATTCC CAGGATTACG ACCTCAAGCT GCCGGAGATG
GAACTTCCCG ACTCCGACAT TCCGCTTACC TTCAACACCA AGGTTGAGTA CTTCGTCCGC
TACTTCCAGG GGCCGGCGCG CCCGGTCTTC GCCAAGTGGC TCTCCCGCAG CGAGCGCTAC
ATCCCGATGA TGAAGACCGT GCTCAAGAAG GAGGGGCTCC CCGAGGATCT GGTCTACCTG
GCGATGATCG AGAGCGGCTT CATGACCCAC GCGGTGTCGG TGGCGAGCGC GGTCGGCCCG
TGGCAGTTCA TGCCCGCGAC CGGAAAGCGC TATGCGCTGA GGATCGACCC CTGGGTCGAC
GAGAGGCGTG ATCCCCTGAA GGCCACGGTC GCCGCGGCGC TCTACTTAAA AGAGCTCTAC
GCCCTGTTCA ACAACGACTG GTACCTGGCG GCTGCAGGGT ACAACGCGGG TGAGAACAAG
ATCCTGCGCG CCATCAACAT GTACAACACC CGCGACTTCT GGGAGATCTC CAAGGGGAGC
TACCTGGCCC GCGAGACCAA GGATTACGTC CCGAAGCTTC TGGCCGCGGC CATCATCGCC
AAGGAACCTG CCAAGCACGG CTTCGCCGAC GTGGCCTACC TTCCCCCCAT CGAGTTCGAT
GTGGTGAAGA TCCCGTCGCG CACCGACCTG GAAGTCGTGG CCAAGGCGTG CGGGGTCTCG
GTGCAGACCG TCCGGGAGCT GAACCCTGCG CTGCGCCGCG GTTCCACCCC GCCCGACTAC
CCGGGGTACC AGTTGAAAGT ACCCAAGGGA ACGGCAGCCT CCTTCGAGAC CGAGTACGCC
AAGGTGCCAG AGTCCGAGCG CTACACCGAA AAGGTGAAGC ACGTGCGCTA CCGCGCCAAG
AAGAAGGACA CCCTCGTCTC CATCGCCAGG CGCTTCAAGA CCACCCCGCA GGCCATTGCT
GAGTTGAACG ACCTGGGGCG CAAAAAGGCC GCCAAGCTTC ACGGGCGGAT GCTGACCGTC
CCGGTGCTGG TGGCGGCGCA GGGCGAGGCG GCGCCGGCTC CGTCCACGGC TGAGGCGAAA
GCGAAGGCTA AGGAATTCCA CAAGTACTAC ACCGTCAAGA AGGGCGATAC CCTCGCCTCC
CTGGCAAAGA GGTTCAACGT CACGGCGCGG GTGCTCTCGG CCTGGAACAA CCTGAAGACC
AAGGTGGCGC TGAAACCCGG CAAGCGCATC ATCGTCGCCA AGTATCAGGA GAAGAAGGGC
GCCGGGGAAC GGGACTCGGG CTAG
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| Protein sequence | MIKTTLIILS LLFSTTAFAA SAGTAAEQRE QRDLARAMQV AYNSSDVALS KGLGLTPSDF
SDDEDFSDDS QDYDLKLPEM ELPDSDIPLT FNTKVEYFVR YFQGPARPVF AKWLSRSERY
IPMMKTVLKK EGLPEDLVYL AMIESGFMTH AVSVASAVGP WQFMPATGKR YALRIDPWVD
ERRDPLKATV AAALYLKELY ALFNNDWYLA AAGYNAGENK ILRAINMYNT RDFWEISKGS
YLARETKDYV PKLLAAAIIA KEPAKHGFAD VAYLPPIEFD VVKIPSRTDL EVVAKACGVS
VQTVRELNPA LRRGSTPPDY PGYQLKVPKG TAASFETEYA KVPESERYTE KVKHVRYRAK
KKDTLVSIAR RFKTTPQAIA ELNDLGRKKA AKLHGRMLTV PVLVAAQGEA APAPSTAEAK
AKAKEFHKYY TVKKGDTLAS LAKRFNVTAR VLSAWNNLKT KVALKPGKRI IVAKYQEKKG
AGERDSG
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