Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0487 |
Symbol | |
ID | 8135796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 599885 |
End bp | 600766 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644868105 |
Product | tyrosine recombinase XerC |
Protein accession | YP_003020325 |
Protein GI | 253699136 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.000000000269064 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGCCG AACTGGAGCA ATTCTATAGC TACCTGGAGA CCGAGCGCAA CGTCTCCCCC CACACGCTCG CCGCCTACCG AAGCGACCTG GAGCAGTTCC TCTCGTTCCT GGCCAAGGAG CGTGAGGAGC CGCGCGCGGA AGAGGTGGAC CACCTCGCCA TCAGGCGCTA CCTGGCGCAG TTGCACAAGG GATGCGCCAA GAGTTCCATC GGCCGCAAGC TCTCCGCCAT CAGGGCGCTC TACCGGTATC TTATGCGCGA AGGAAAGCTG GAGAAAAATC CGGCCGAGCT GGTGAGCACC CCGAAAAGGG AGAAACGGCT CCCGTTCCAT CTCAACATCG ACCAGGTCAG CGCGCTGGTG ACCGCGCCCG CCGGCGGCTC CGAACTGCCG CTTCGCGACC GCGCCATCCT GGAGACGCTC TACTCCTGCG GCATCAGGGT GAGCGAGTTG ACCGGCATGA ACGTGGGCGA CATGGATCTC GCAGCGGGCC TTGCGCGGGT CATGGGCAAA GGGGGGAAAG AGCGGCTGGT CCCGGTGGGA TCCTGCGCCG GGAGCGCCCT TGCCGCCTAT CTCGCCGAAC GCGCGGACCC GGGGCCGGCC GAGCCGCTGA TCCTGAACGC CCGGGGGGGG CGGCTCACCC GGCGCAGCGT GGCGCGCATC GTCGACGCCC ACATGCTCAT GATCGCCACC ATGCGCAAGG TCTCCCCGCA CACGCTGCGC CACACCTTCG CCACTCATCT GCTGGAAGGA GGCGCCGATC TGCGCGCCAT CCAGGAGCTT TTGGGGCACG CCTCGCTCTC TACCACCCAG AAATACACCC ACGTCAGCAT CGACAAGCTG ATGGAGGTCT ACGACAAGTC CCACCCCAAG GCGCGCAAGT AA
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Protein sequence | MKAELEQFYS YLETERNVSP HTLAAYRSDL EQFLSFLAKE REEPRAEEVD HLAIRRYLAQ LHKGCAKSSI GRKLSAIRAL YRYLMREGKL EKNPAELVST PKREKRLPFH LNIDQVSALV TAPAGGSELP LRDRAILETL YSCGIRVSEL TGMNVGDMDL AAGLARVMGK GGKERLVPVG SCAGSALAAY LAERADPGPA EPLILNARGG RLTRRSVARI VDAHMLMIAT MRKVSPHTLR HTFATHLLEG GADLRAIQEL LGHASLSTTQ KYTHVSIDKL MEVYDKSHPK ARK
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