Gene GM21_0480 details

Gene Information

• Locus tag: GM21_0480
• Symbol: upp
• ID: 8135789
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 589059
• End bp: 589688
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 644868098
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_003020318
• Protein GI: 253699129
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.0000000000000100882
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAGTGTCC ACGAAGTAAA CCATCCGTTG GTGAAGCACA AAATCGGCCT GATGCGTGAG 
GCCGGGATCA GCACCAAGAA GTTCCGCGAA CTCACCTCGG AGATCGCTTC CCTGCTCGCT 
TACGAGGCCA GCAGGGATTT CCAGATCGAG CCGAGAACCA TCACCGGCTG GGACGGCAGC 
AAGGTGGGGA TACAGCAATT GAAGGGGAAG AAGGTGACGG TGGTCCCGAT CCTGCGCGCC 
GGCATCGGGA TGCTGGACGG CGTCCTGGAC ATGATCCCCA ACGCCAAGGT GAGCGTGGTG 
GGGCTGGCCC GCAACGAGGA GACGCTGGAG GCGCACACCT ATTTCGAGAG GTTCGTCGGA 
AACCTGGACG AGCGTCTTGC CCTTATCATC GACCCCATGC TCGCTACCGG CGGTTCCATG 
GCCGCCACCA TAGAGATGCT CAAGAACAAC GGCTGCCTCC AGATCCGCGT CCTTTGCCTC 
GTCGCCGCTC CGGAAGGGCT GGCGAGGATC ACCGCTGCCT ACCCGGAGAT CGACATCTAC 
GTCGCAGCCA TCGACGAGAG GTTGAACGAG CAAGGGTACA TCCTCCCTGG CTTGGGAGAC 
GCCGGCGACA AGATCTTCGG CACCAAGTAA 

 

Protein sequence

MSVHEVNHPL VKHKIGLMRE AGISTKKFRE LTSEIASLLA YEASRDFQIE PRTITGWDGS 
KVGIQQLKGK KVTVVPILRA GIGMLDGVLD MIPNAKVSVV GLARNEETLE AHTYFERFVG 
NLDERLALII DPMLATGGSM AATIEMLKNN GCLQIRVLCL VAAPEGLARI TAAYPEIDIY 
VAAIDERLNE QGYILPGLGD AGDKIFGTK