| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0472 |
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| Symbol | |
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| ID | 8135781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 577832 |
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| End bp | 580393 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644868090 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_003020310 |
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| Protein GI | 253699121 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.00000400428 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGATG CAGATAGCAA AAATGCCGGG AATCGTTCCA GAGACCGCAA CGACTTTGAC
AGCGACAACG TCTCCCTGTC CACGGAAGAA CTGGTCAGGG AACTGCAGGT CTATACCGAC
CTCTACGAGT TCTCCCCCGT AGGACTTTTC ACCCTCGACG CCGCCGGGAA CATCCGTAGC
GTCAACAACA CCGGGGCCGG CCTCCTCGGC AAGCCTCGGC CGGAACTGGT CGGAGTCCCT
TTCGAGCAGG CGGTGGCGGA GCCCTCCAAG GGGGACTTCT CCGTTTTGCT GAACGACGCC
CGCACCAGCC AGTCAAAATC CGCCTGCGAA CTAACCCTCG TCTCCGCCTC CTCCCGCCAG
CTTCCGGTGC GCATAGATGC CCTCTGCTGC AAAGAGGGGA CGGAATACCG GCTGTCGGTG
CTCGACATCA CCAAGCGCAA GCAGTCGGAG CTGGCGCTCC AGCGCTCAGA GGCCCGCTAC
CGCCGCCTGT TCGAGACCGC CAAAGACGGC ATCATGATCG TCGAAGCCGA CAGCGGTGCC
ATCGCCGAGG TCAACCCTTT CCTGGTCGAT ATGCTTGGGT GCAGACGGGA CGAGCTCCTG
GGCAAAACGG TCTGGGAACT CCACTTCTTC GCCCACGTCG TACCGGGCGC CGCCGACTTC
AAGGCGATGC AGCAAAAGGA ATTTTTTCAT GGCGACGACC TGCAACTGGC CACGGTGCGG
GGGCGGGATA TCCCCGTTGA GGTGGTAAGC AACTGCTACC AGTCGGAGCA AAGCAGCGTG
GTGCAGTTCA ACATACGCGA CATAAGCATC CGCAAGAATG CGGAACAGGC GCTTCTTTCC
AGCGAAGAAC AGTGCCGGAC CATAGTCAGC AACATCAACG AGTACGTCTA CAGCGTCCGC
TTCGAAGAGG GGGACATCAC CTCCGTCTAC CACAGCCCGA AGTGCTTCGA CATCACCGGA
TACACCCCGG AGGAGTACTA CCGGGACCCC CTGCTCTGGT TCACCATGAT CCACGAGGAG
GACAGAAATC TCGTGGTCGA GTTTCTCAAC GGCATCTTCG CCGGGCTGGA CCACGAGCCG
ATACGTCACC GCATCATCCA TAAGGACGGC TCGGTGCGCT GGATCGTCAA CAACTGCGCG
GTGCAGAGGC AGCGCAGGGG GGACCGCCTC AGCATCACGC GGCTGGACGG CTTCATCCTG
GACGTCACCG ACATCAAAAG GGCCGAGGAA AACATCTTCT TCCTGGCCCA CCACGACCCG
CTCACCAAGC TTCCCAACCG CAGCACCCTC TACGAGCGCA TGGAGCAGGT AATCTGCGCG
GCCCAGAAGA GTTCACGCAA CGTGGCCCTG CTCTTTCTCG ACATCGACGG TTTCAAGCAG
ATCAACGACT CCATGGGGCA CGACGTAGGG GACAGGCTGC TGCAATCGGT GGCCAAAAGA
CTCAGCGACT GCACCCGATC CTGCGACGTC GTCTCCAGGC TTGGGGGGGA CGAATTCGTG
GTGATGCTGT GGGACTGCGG CGAGGCCGAG ACCACGGTCG TCGCGGAGAA GGTCATCAAC
GCAGGGTTTC CGGTTCTGGG CAGCAACGTC ACCGTGACCC CCAGCATCGG GATCAGCATC
TTCCCCGACG ACGGCCGCGA TTACCTGACA CTTTTGAAGC ACGCCGACAT AGCCATGTAC
CACGCAAAGA AATCCGGGGG AAACAACTTT CAGTTCTTCA CCCACAAGCT GAACGAGATA
GCGCACGAGA GGTTCATGCT GGAAGCGGAG CTGCGCCGGG CGCTGGACCG GGAAGAGTTC
GTTCTTTATT ACCAGCCCAA GGTCGACCTC TCGACCGGGA AGTTCAGCGG CATGGAGGCG
CTGATCAGGT GGCAGCACCC GGCCCACGGG CTGATGCTCC CGGAAAGCTT CATCGGCATC
GCCGAGGAAT CCGGCCTTCT CACCCAGATC AGCAAATGGA TCATCCCCAC CGTCTGCCGC
CAGATCCAGC AGTGGCAGCA GCAGGGAATC AACTCCGTTT CCGCTGCGGT CAACCTCTCC
GCCAGTTTCT TCCAGCACCC CGACTTCGAG GAAACCATCG AAGAGTCGCT GCTGCAAACC
GGCATCGCCC CGGAGTGCCT GGAGCTGGAG CTCACCGAGG CGACCATCAT GAGCGACCCG
CAGCGGGTCT TAGGGAGCAT GGCGGCCATG AAGGCTCTCG GGCTGCAGCT CTCCATAGAC
GACTTCGGCA CCGGCTATTC CAGCCTGAGC TATCTGAAAA AACTACCCGT CGACAAGCTG
AAGATAGATC AATCCTTCAT CCACAACATC GCCCGCGACG CCGACAACGC CGCCGTGGTG
CGTGCCGTGA TCAGCATCGG GCGCAGCATG CAGCTCAGGG TGATCGCCGA GGGGGTGGAG
AATGCGTCCC AGCTCGCTTG GCTGCAGGCC GAAGGGAGCG AGGAAGCGCA AGGGTACTAT
TTCAGCCGCC CCCTGCCGGT GGCGAAGATG ACCTCGCTTT TGAAGCAGGG GGCGAACTTC
CTGCACAACC CGCGCGGAAA GACACAGGCG AAGACACTTT AG
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| Protein sequence | MIDADSKNAG NRSRDRNDFD SDNVSLSTEE LVRELQVYTD LYEFSPVGLF TLDAAGNIRS
VNNTGAGLLG KPRPELVGVP FEQAVAEPSK GDFSVLLNDA RTSQSKSACE LTLVSASSRQ
LPVRIDALCC KEGTEYRLSV LDITKRKQSE LALQRSEARY RRLFETAKDG IMIVEADSGA
IAEVNPFLVD MLGCRRDELL GKTVWELHFF AHVVPGAADF KAMQQKEFFH GDDLQLATVR
GRDIPVEVVS NCYQSEQSSV VQFNIRDISI RKNAEQALLS SEEQCRTIVS NINEYVYSVR
FEEGDITSVY HSPKCFDITG YTPEEYYRDP LLWFTMIHEE DRNLVVEFLN GIFAGLDHEP
IRHRIIHKDG SVRWIVNNCA VQRQRRGDRL SITRLDGFIL DVTDIKRAEE NIFFLAHHDP
LTKLPNRSTL YERMEQVICA AQKSSRNVAL LFLDIDGFKQ INDSMGHDVG DRLLQSVAKR
LSDCTRSCDV VSRLGGDEFV VMLWDCGEAE TTVVAEKVIN AGFPVLGSNV TVTPSIGISI
FPDDGRDYLT LLKHADIAMY HAKKSGGNNF QFFTHKLNEI AHERFMLEAE LRRALDREEF
VLYYQPKVDL STGKFSGMEA LIRWQHPAHG LMLPESFIGI AEESGLLTQI SKWIIPTVCR
QIQQWQQQGI NSVSAAVNLS ASFFQHPDFE ETIEESLLQT GIAPECLELE LTEATIMSDP
QRVLGSMAAM KALGLQLSID DFGTGYSSLS YLKKLPVDKL KIDQSFIHNI ARDADNAAVV
RAVISIGRSM QLRVIAEGVE NASQLAWLQA EGSEEAQGYY FSRPLPVAKM TSLLKQGANF
LHNPRGKTQA KTL
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