Gene GM21_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0449 
Symbol 
ID8135758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp541831 
End bp542949 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content59% 
IMG OID644868067 
Productputative capsular polysaccharide biosynthesis protein 
Protein accessionYP_003020287 
Protein GI253699098 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4421] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones104 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACG AGCACGAAAA GGCAGTCAAA GAGAAAAGAC GTCAAGCGCA GAAGCTATCT 
CTGGAGCTGC TAGGTCCCAT CGTCGGCAAG ATGCCGAAGT CGAGCATCGA GTCGCTGGAG
AAACTCTCGT ACCTTCCGAA GATCCAACGG CATATCGCCG AAATCATCCA AGTCGCCGAT
TCCTGCATAG TAAAGCACGA CCTGAAGGGC TCCTTCCCTC CATTCATCAG ATCACAGGCG
GCCTTCGGCA AACGTAACCT CTACCTCTTG AAAGACGCCG TAGTCTCCCC CGATTCGGGC
ATGGTCTGGA TCGGGAACAG GATTCTCGAG GAGAGCGTGG GGTCCCTGCG CCGCATCATG
GACTGGGGGG ACATGCTGCA CGAACCGCTT CTTCCGGTGA GCGAGCTCAA GTCGCAGGAA
CCTGTCGTCG TCTGCCATCC CGCCGCAGGG TACTACCATT GGCTCCTGGA GGTCCTGCCC
AACCTTCTTT TCGCCATCTC CAGGTTCCCC CAGGTCAAGA TCGTCCTTCC CGAGAACTCC
CCTGCCTACG TCTTCGACGG GTTGTCCATG ATCCTCGGCC CCGAGGGAGC CGACCGGTTC
ATCTTCTGCT CCACTCCGCT GAAGGTAAGG AGCCTGGTGA TGCCGCAGTA CCACACCGCA
CCCGAATTCA CCAGTCCACA GGCCATTGAC CTCCTCAAGT CGCAGGTGAA GCCGAAGGTC
GTTGCCCGTG AGACCTCCGG CGCGCCCGCA TCCGGAACCA AGCTCTACAT CTCGCGGCGC
AAAAGCAGGA GGCGCCGGTT GTTAGGCGAG GAGGAGCTTG AGAGGAAGCT CCAGGAAAAG
GATTTCAGCA TCCTGCACCT GGAGGACTTT TCTTTCCAGG AGCAGATCCG CATCTTCCAC
CACGCCGAGA CGGTAGTGTC GACCCATGGC GCCGGCCTGA GCAATCTCGT CTGGTGCGAG
CCCCCGTGTA AGGTGATCGA GATATTTCCC AGGAATTACA TCCTCGACTG TTTCGCCTGG
CTCAGCTTCA GCCAAGGTTT CGACTATCGC TACGTCATCT GCAGCACCGG GCACAAGATA
GACGACGAAG CCATGGCCGG CGTGCTGGGG CAGCTGTAA
 
Protein sequence
MKHEHEKAVK EKRRQAQKLS LELLGPIVGK MPKSSIESLE KLSYLPKIQR HIAEIIQVAD 
SCIVKHDLKG SFPPFIRSQA AFGKRNLYLL KDAVVSPDSG MVWIGNRILE ESVGSLRRIM
DWGDMLHEPL LPVSELKSQE PVVVCHPAAG YYHWLLEVLP NLLFAISRFP QVKIVLPENS
PAYVFDGLSM ILGPEGADRF IFCSTPLKVR SLVMPQYHTA PEFTSPQAID LLKSQVKPKV
VARETSGAPA SGTKLYISRR KSRRRRLLGE EELERKLQEK DFSILHLEDF SFQEQIRIFH
HAETVVSTHG AGLSNLVWCE PPCKVIEIFP RNYILDCFAW LSFSQGFDYR YVICSTGHKI
DDEAMAGVLG QL