| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0436 |
|---|
| Symbol | |
|---|
| ID | 8135745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 522949 |
|---|
| End bp | 528078 |
|---|
| Gene Length | 5130 bp |
|---|
| Protein Length | 1709 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644868054 |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_003020274 |
|---|
| Protein GI | 253699085 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1360] Flagellar motor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 121 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAAGC AAAGTATCGC CCTTACATTC ATGATCCTCG CGTCCGTGGC CGGAGCCGGG
CCCGCCGCCG GTGCGCAGAG CGCGCCCGCG CCGGCTGCCA AGGCTGCGAG CTCACAGGCT
GCCACGGCCG CCCCCAACGT CAGGGAGGCC GCGAGCCGCG GCGAGGCGAC CGAGGGGCAC
CTCCCCAAGG ACGTCACCTA CACGCCGTGG CTGCTCGACC CCTCCGTCTT TGCCCAGGAC
CAGGGGGACC GCACCGAAAA GCGTCAGGTC GCCGAGAAGG AAGTGAAGAC GGTGAAGGTG
GCCAACCTGG TCCCTCCCAT CCGTTTCCGC ACCGGTGACG CGGAGATATC AAGCGAATAC
CTGGAACTTT TGCGCGGCGT GCTGGAAAAG ATGCGCGGCC GCGACAACGT GCGCCTGCAC
TTCGTGGGAC ACGCCGACAC GCAGCAGCTG AGCGGGCCGC TCAAGGAGAA GTTCGGCGAC
AACACCGGCC TGTCCCGGGA GCGCGCCGGC ACCACCGCGG AATACTGCCA GCGCGCCCTG
GCTCTCCCGC CGGAAGCCAT CTCATACCAG GGGCTGGGGG ACGCCAAGCC GGTCGCCCCC
AACAGCACAG AGGAGGGGAG GGCGCTAAAC CGCAGGGTCG AGGTCGAGGT CTGGTACGAC
GAGATCGGCG AGAAGATGGT GGAGAAGGAG GTGGTCGTCC CGGCGCAGGT GAACCGCGTC
AAGGTCTGCC GCACCGAGAC GGTCTGCAAG ATGCGCTACA AGGAGGGGCT CTCCCACCGC
GTCCGCGTCA GGAACCTGAT CGCCCCGCTG CAATACGATG CGGCTCTTCT GACCGTGCCG
GAGGAGTTCC AGCAGCGGAT CAGGCAGGCG CTCGACAATC TGCAGGGAAA GCAGAACCTC
TCCGTCAAGT TCATCGCCTA CAGCGACACC TCGCCGCTTG AGGCGCGCGA CGAGCGGATC
TACGGCGACC AGCTCGGGCT CTCCAAGGCG GTCGCCCGGC GCGTGGCGCT CGCCGTCCAG
GAAGCGATGA AGGGTTCGAA GGTCGCCTTC GAAAGCGACG GCAAAGGAAG CGCGCTCCCG
GTCGCCTCCA ACGAGACGCC GCAGGGAAGG GTCCTGAACC GGCGCGTAGC GGTCGAGTTC
TGGCATGACG ACGCGATGCA GGAACTGCCG GACGAGCCTC AGCTCTGCCC GGAAGACGCG
GGCGCCGAGA CGGTCACCAA GGTCTACGAC CCTCCCTCCG GCGCTATCGC CCCGATCCTT
TTCCAGGACG GCAATCCTGT GCTGCCGGAA GGGTACACCG AACGTCTCGG GGTGCTCATG
GGGGAGATCA AGGAGCGGGC CAACGTGCGG CTGCGCTTTA TCGGCTACAT CGACAACGAG
CGGCTCGACC GGCGCAACGC CGCCATCTAC GGCGACGACG TCGGCTGGTC CACGGCGCGC
GCCCGCCGGA GCATGACCGT CGTGGGGGAG AAGATGGCGC TTTCCGGGAA CAAGGCGGAA
TTCGAGGGGC GGGGATACGT GCAGTCCGCG GACGTGGTCG TCACCGGGTT CAGCGGGACG
GGCGCCTCCA GGGTCGAGGT ACAGGTCGTC TATGACGAGC AGGTCCCGAT CAACGACTAC
GAGGGGGTGG ACATCGTCCG CATGACCCGC GAGGTGAACA CGGCCGACCC GCTGGGGCTG
AACCTTTTGC GCATCTCGGT GGACGGCAAG CCGGTGGACG ACCTGAACAA GAGCATCCCG
GACCTGCAGC GCTGCACCGA CCTGGCCCTC GACCGCGCGA AGATCGAGTT CAAGTACGAC
AACTTGAAGG CGCTCCCCAG GCTGAACGTG ACCGCCTGGC CGCGCAGCGT CCGCTACCGG
GACCTGGCCG AGACGGAGTT CCCCGAGAAC CTGGTCCGCT TCCGCCTCTA CACCAACTAC
CACAGCTTCA TCAAGCGGGC GGAGGTCAGG GTGTTCGACG AGGCACAGTC GGTGCGCGAC
CTTCCGCTGG CGGTCGTCCC CATGGACGGC GAAGGGAAGG CCCAGTGGAG CGTCGGCTTC
GAAACCCCGG CGACCCCGGC CCGCGAGCTC AAGTACCTGG TCCGCGTCTT CGATGCCGAG
GGGAACTTCG ACGAGACCGC GCCCCAGCCG CTTTGGGTGA TCGAACAGGT CGACCCGGGC
ATCGCCAGCT CCGACCCGGA GCGGGAGCTT CTGGCCGGAT ACGGCGCCAG CCGCTTCGCG
CAGAGGAATA TCCCGGTAAG CGGCGGGACG GTCCGGGCCT ACGGCAGTTC CATCCCCCCC
GAGCACCGGG TCTGGCTTGC CGGGTACCCG GGGCCGGTGG ATGCCAGGGG GCGCTTCATC
GCCGAGGAGA TCCTGCCCAA GGGGATGCAC ACGGTCGAGG TGGCGGTGCT CGACAAAACC
GGCAACGGGG AACTCTTCCT GCGCGACCTG GCCATGCCGA AGAACGACTG GTTCACGGTG
GGGATCGCGG ACCTGACCCT GTCGGCCAAC AAGACCAGCG GACCGGCGCA GCTCCTCGCC
CCGGACAAGC CCAAGTACAG TCGCGACTTC AACGCCGACG GACGGCTCGC CTTCTACACC
AAGGGGCAGT TCGGCAACGG CTGGGGGCTC ACCGCCAGCG CCGACACGCG CGAAGGGGCG
CTGGACGAGA TCTTCTCTAA CTTCCTGGAC AAGTCGCCCG AGGCGCTTTT CAGGCGTATC
GACCAGGATT ACCACTTCCC GACCTACGGA GACGACTCCA CGGTGCTGGA GGACGCGCCC
ACCAGCGGGA AGTTCTACGC CAAGCTGAAA AAGAACCAGA ACTACGGCCT GTGGGGCAAC
TTCAAGGTCG GCTACACCGA CAACGACCTG GCGCACGTCG ACCGCGGGCT TTACGGCGCG
AACCTCCATT ACCAGAACCC AGGCGTCACG AGCTTCGGCG AAAAACGCCT CATGGTTGAC
GGCTTCGCCG CCGAGCCCGG TACCGTGGCG GGGCGCGACG AGTTCCGCGG CACCGGCGGC
TCGCTTTACT ACCTGCGCCG CCAGGACGTG CTTCAAGGCT CCGAGCGGGT GCGCGTCGAG
ATCCGGGACA AGGACTCTGG GATCGTCCTG GCGGTGAAGG ACCTGGCCCC CGTGCAGGAC
TACGACGTCG ACTACCTGCA GGGGCGCCTG GTGCTGACCC AGCCCCTGGA ATCGACGGCG
GCGGACAACC TCCTGGTGCG AAGCGACGCG GCGGCCGGAA ACCCGGTGTT CCTCGTGGCC
CGCTACGAAT ACACCCCGGG AATCGAGGAG CTCGACGCCA TGACCGTCGG CGGCCGGGCC
CACTACTGGT TCGGGGATCA CGTCAAGCTC GGCGTGACCG GAAGCCGGGG CAACGACGCG
CAGATCGAGG AGAGCCTGCT CGGCGCGGAC CTGACCCTGC GCCAATCCGC CGGCACCTGG
CTCAAACTGG AAACCGGCCG CAGCAAGGGG GCGGGGCTTT TCACCGCCAC CTCGCCCGAC
GGCGGCTTCA ACTACAGCGC GGTCCAGACA CCCGCCGATG CCGCCGTCGC CGCGGGCGCC
TACAGGCTCG ACGCGAGCCT CGGGCTTCAG GACCTCAACA AGGATTGGCG CGGCCGCTTC
ACCCTTTACA GCCAGCTGCT GGAGGCAGGT TATTCGGCGC CGGGCCAGAT CGCGGAAAAG
GAAACGGTCC AGGTCGGCGG CACGGCGGAG GTCCCGGTGA ACGACCGGCT GAGGCTCAAC
CTGAAGGCCG ACCAGCGCAC CGTGGACCAG GGACTGGAGA CGGTGGCCGC CGAGGCGAAC
GCCAACTACC AGATGAACGA AAACTGGAGC GCGGGACTGG GGGCGCGCCT GGACAGCCGT
GAGGACGACT CCCCTGTGGT TCCCCTGACC CAGGAAACGG GGGAGCGCAC CGACCTCGTG
GGCAAGGTCT CCTACGATTC CAAGGAGCGC TGGAGCAGCT ACCTTTTCGG CCAGCAGTCG
GTCCTTACCT CGGGCAACCG CGAGGACAAC GGCCGGGGGG GCGTCGGGGG CTTCTACCGG
GTGACCGACC GCTTCAAGGT GAACGGCGAG CTCTCCGCGG GAGACCAGGG TGCCGCCGGG
CGCTTCGGCA GCGAGTACCT CTACAGCGAC CGGACCACGC TTTACCTCAA TTACGCCCTG
GAGAACGAGC GCTCGGATAA CGGCGTGCAG GCGAACAAGG GGGCCGTGAC CTCGGGGTTT
CGCACCCGCT ACTCGGACAG CGCCAGCGTC TACGGCGAGG AGCGCTACAC CCACGGCGAC
GTCCCAAGCG GCCTGCTCCA TTCCTACGGC GTGGATCTCG CCCCTGCCGA CCGGTGGAAC
CTCGGGGCCA AAGGGGAACT GGGCACGCTG AAGGACAACC TGACCGGCGC CGAGCTGAAG
AGGACGGCGC TTGGGGTGAG CGCCGGTTAC GGCTTTGACA AGGTCAAGCT GTCGAGCGCG
CTCGAATACC GGGTGGACGA CGCCGAACAG CCGGACCTGA GCTCCGTCAA GCGCACCACC
TGGCTTTCGA AAAACAGCTT CAAATACCAG ATGACCCCGG ACTGGCGGCT CATCGGCAAA
TTCAACTATT CCCAGAGCAC CAGTTCGCAG GGCGATTTCT ACGACGGCAG CTATACCGAG
GCGGTGGTGG GGTATGCCTA CCGTCCCGTC GCCAACGACC GGCTGAACGC CCTGGTCAAG
TACACCTACT TCTACAACAT GCCGACCACG GAACAGGTGA ACGGCACCAG CACGACTGCC
GGCGTGATGC AGCGCAGCCA CATCGCCTCC GTCGACGCCA TGTACGACCT GACGCCGCGC
TGGAGCGTCG GGGGGAAGTA CGCCTACCGG CTCGGCCAGG TGAGCATGGA TCGGGTCAAT
CCCGAGTACT TCGACAGCCG GGCCCACCTC TACGTCGCGC GGGTGGACTG GCGTTTCCTG
CACAAGTGGG ATGCGCTCGC CGAAGCGCGC CTGCTCGACC TGCCGGACGC CAAGGACCGG
CGCGGCGGCG TGCTTTTGGG GCTCTACCGC CATCTGGGGA ACAACTTCAA GGTCGGCGCC
GGCTACAACT TCAGCGACTT CTCCGACGAC CTGACCGACC TGAGCTACCG GCACGAGGGT
GTCTTCGTGA ACGTAGTGGG AATGATCTAG
|
|---|
| Protein sequence | MVKQSIALTF MILASVAGAG PAAGAQSAPA PAAKAASSQA ATAAPNVREA ASRGEATEGH
LPKDVTYTPW LLDPSVFAQD QGDRTEKRQV AEKEVKTVKV ANLVPPIRFR TGDAEISSEY
LELLRGVLEK MRGRDNVRLH FVGHADTQQL SGPLKEKFGD NTGLSRERAG TTAEYCQRAL
ALPPEAISYQ GLGDAKPVAP NSTEEGRALN RRVEVEVWYD EIGEKMVEKE VVVPAQVNRV
KVCRTETVCK MRYKEGLSHR VRVRNLIAPL QYDAALLTVP EEFQQRIRQA LDNLQGKQNL
SVKFIAYSDT SPLEARDERI YGDQLGLSKA VARRVALAVQ EAMKGSKVAF ESDGKGSALP
VASNETPQGR VLNRRVAVEF WHDDAMQELP DEPQLCPEDA GAETVTKVYD PPSGAIAPIL
FQDGNPVLPE GYTERLGVLM GEIKERANVR LRFIGYIDNE RLDRRNAAIY GDDVGWSTAR
ARRSMTVVGE KMALSGNKAE FEGRGYVQSA DVVVTGFSGT GASRVEVQVV YDEQVPINDY
EGVDIVRMTR EVNTADPLGL NLLRISVDGK PVDDLNKSIP DLQRCTDLAL DRAKIEFKYD
NLKALPRLNV TAWPRSVRYR DLAETEFPEN LVRFRLYTNY HSFIKRAEVR VFDEAQSVRD
LPLAVVPMDG EGKAQWSVGF ETPATPAREL KYLVRVFDAE GNFDETAPQP LWVIEQVDPG
IASSDPEREL LAGYGASRFA QRNIPVSGGT VRAYGSSIPP EHRVWLAGYP GPVDARGRFI
AEEILPKGMH TVEVAVLDKT GNGELFLRDL AMPKNDWFTV GIADLTLSAN KTSGPAQLLA
PDKPKYSRDF NADGRLAFYT KGQFGNGWGL TASADTREGA LDEIFSNFLD KSPEALFRRI
DQDYHFPTYG DDSTVLEDAP TSGKFYAKLK KNQNYGLWGN FKVGYTDNDL AHVDRGLYGA
NLHYQNPGVT SFGEKRLMVD GFAAEPGTVA GRDEFRGTGG SLYYLRRQDV LQGSERVRVE
IRDKDSGIVL AVKDLAPVQD YDVDYLQGRL VLTQPLESTA ADNLLVRSDA AAGNPVFLVA
RYEYTPGIEE LDAMTVGGRA HYWFGDHVKL GVTGSRGNDA QIEESLLGAD LTLRQSAGTW
LKLETGRSKG AGLFTATSPD GGFNYSAVQT PADAAVAAGA YRLDASLGLQ DLNKDWRGRF
TLYSQLLEAG YSAPGQIAEK ETVQVGGTAE VPVNDRLRLN LKADQRTVDQ GLETVAAEAN
ANYQMNENWS AGLGARLDSR EDDSPVVPLT QETGERTDLV GKVSYDSKER WSSYLFGQQS
VLTSGNREDN GRGGVGGFYR VTDRFKVNGE LSAGDQGAAG RFGSEYLYSD RTTLYLNYAL
ENERSDNGVQ ANKGAVTSGF RTRYSDSASV YGEERYTHGD VPSGLLHSYG VDLAPADRWN
LGAKGELGTL KDNLTGAELK RTALGVSAGY GFDKVKLSSA LEYRVDDAEQ PDLSSVKRTT
WLSKNSFKYQ MTPDWRLIGK FNYSQSTSSQ GDFYDGSYTE AVVGYAYRPV ANDRLNALVK
YTYFYNMPTT EQVNGTSTTA GVMQRSHIAS VDAMYDLTPR WSVGGKYAYR LGQVSMDRVN
PEYFDSRAHL YVARVDWRFL HKWDALAEAR LLDLPDAKDR RGGVLLGLYR HLGNNFKVGA
GYNFSDFSDD LTDLSYRHEG VFVNVVGMI
|
|---|
| |