Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0423 |
Symbol | |
ID | 8135732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 498489 |
End bp | 501008 |
Gene Length | 2520 bp |
Protein Length | 839 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644868041 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003020261 |
Protein GI | 253699072 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 115 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCCAC CCCCCACACA GGAAGAGCAG ACGGAAAACT ACCTTAGACG CGGCGCGGCT CTAAGCGGAA TTGTCGCGTC TGTCATCGGA GCGATCCATC TCGCCCTCTG GCTCTCCGGC CTCCTTACCT CAAGCGGACT ACATTCTTTC GTGATTAAGA CCAACGCCTC TTTGTGCCTG ACCCTCTTCG GGCTTGCTTT AGCCCTTGCC ATCGTGGCGG AAGAAGGCAG GGGGGCGAGG AGGTGGTGGT CGGCCGCTCT CGCGGCACCG GCAACGGTCA TCGCGGCCCT TACCCTTCTC GAACACCTAC TCGATGTGGA TTTCGGCATC GATCAGCTCC TGGCACGTGA ACAACCCGGG GCCTTGGGCG TCCTGCATCC GAACCGGATG GGCCCTCCCG GTGCTGTCTC CTTTACCCTC TGCGGCATCG GGATCTTCTT CCTGCTGCAG GGGAAACGGG GCGCGATCCG CGTGGCGCAG TTTCTGGGGT TTATCCTTTG CCTGCTTGGC TTGATGGGGC TTCTCGGCTA CCTCTACCAG GTGGAAGGGT TCTATGCGGC GCCGCGCTTG ACAGCCATTG CATGGCCGAC GAGCTTTTCC ATATTTCTTC TTGGCATCGG GCTTCTCCTC GCGAGGCCGC GGGAGGCGTT CACGGCGGTC TTCACGTCGC CTACGCCCGG AGGTTTCGTG TCGCGCGCCC TGCTGCTGCC TGCCGTCTTA CTCCCCATCC TGCTCGGGTG GCTCGTTCTC GCCGGGGAAC TCCGCGGCCT TTACGAGACC ACCTTCAGCA TAAGCCTCCT CATTCTCTCC TGGATCGTCA TCTTCTCCGT CATCGTCTAC GAAATTGGAA AACGCGCCGA GTTTCATGTG CGGTTGGTGG AGGACCAGCG TACCCGCGAG ACGCTGCGCC AAAGCGAGGA GAAGCTACGG GAAATCATCG ACAACATGGC CGAGGGACTC ATCGTCATCG ATGCGGAGAC CGCGGGGCTT TCCTGGAACC GCAGGGCACT GGAAATGTAC GACTTCAAGG AGGAAATGGA CGCGATAAAG ACCTTCGAAA CCACAGCCCC AAAAATCGAG CTGAGGACGC TGGAAGGAGA ACTCCTCCCT ACGGAGCAGT GGCCGATACG ACGGGTGATG AGGGGGGAGG AACTGCACGA TGTGGAACTT TTGGTGCGCA ACAAAGAGCA GGCCTGGCAG CGGATCTACA GCTACCGCGG TGCTACGATC CGCGACGCGC AGGGGAAGCT GCAGATGGGG GTCCTGACGC TTCGGGACAT CACGGTGAAA AGGCAGGCCC AGGAGGCGCT CAGGGAGAGC GAGGAGAAGT TTCGGGCCGT GTTCGAGCAG GCGGCGGTCG GGATGGGGCG GGTAACCTTC GGCGATGCGC GCTGGATCGA TGTCAACGGA GCGTTCTGCA ACATGCTCGG CTACAGCCGC GAAGAGATGC TGGCGACCCC CTGGCCCGAG ATGACTCACC CGGACGACCT GGACCTAGAC CTCGTCCCGT TCAGAAAGAT GTCCGCAGGG GAGTTGAACA GCTACAGCGT GGAAAAGCGC TTTCTGCATA AAACCGGGCG TTACGTATGG GCGAGGCTCA CCCTGTCCCT GGTGCGCGAC CGCGTTGGTG CGCCGTATTT CGAAGTAGCG ATCATCGAGG ACATCACGCG CAGGAAAGAG GCGGAGGAGG CGCTTCGCAA GGCGAAGGAC GAGCTCGAGC TGCGGGTAAG GGAGCGGACG GCGGAGCTTG AGCAGGCATA CGTCGCGCTG CAGCGTGAGA CCGACCAGCG CCTTGCCGCT GTCGAGGACC TGCGGGAAAA GGAGCAGCTT CTCATGCGGC AGAGCCGGTT GGCAGCCATG GGGGAGATGC TCGGCAACAT CGCGCACCAG TGGCGGCAGC CGTTGAACGT CCTCGGGCTC CACGTCCAGC AACTGCAACT GACCTACGAA GTGGGAGAGT TAAGCGGCGA GTTTTTGACG GGGGAGGTTG CCAAGGTGAT GGAACTCATC AGGCACATGT CCGATACTAT TACGGATTTC AAGGATTTCC TGAAGGAGGA GAAGGAGCCG CAACCGTTCA ACGTCAATGC CGCCGTGGCC GCCACCCTTA CGCTTCTAGA AGCGCCGCTT AAAGCGATGC GGGTGGATCT CCGCATAGAG CAGACGGACG AGCTCGTGGT GATCGGACAC CGAAACGAGT TCTCCCACGT AATAATGAAC CTGGTGAACA ACGCGAGGGA AGCGCTCAAC GAGCGGGCGG TGGCGACGCC GCGGATCTGG ATACGGCTTT TCAAGGATGG GGGGAGATCC GTAGTCACCG TCACGGATAA CGCGGGGGGA GTTCCGGAAG AGATACAGCA GCGGATCTTC GAACCGTACT TCACCACCAA AGGGCCGGAC AAGGGAACCG GGATCGGACT CTACATGTCG AAGAACATCA TCGAGAAGAG CATGGGGGGG AGGCTCTACG TGCGGAACAC CGCAGAGGGC GCGGAGTTCA GGATCGAGCT TCCCGGATAG
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Protein sequence | MVPPPTQEEQ TENYLRRGAA LSGIVASVIG AIHLALWLSG LLTSSGLHSF VIKTNASLCL TLFGLALALA IVAEEGRGAR RWWSAALAAP ATVIAALTLL EHLLDVDFGI DQLLAREQPG ALGVLHPNRM GPPGAVSFTL CGIGIFFLLQ GKRGAIRVAQ FLGFILCLLG LMGLLGYLYQ VEGFYAAPRL TAIAWPTSFS IFLLGIGLLL ARPREAFTAV FTSPTPGGFV SRALLLPAVL LPILLGWLVL AGELRGLYET TFSISLLILS WIVIFSVIVY EIGKRAEFHV RLVEDQRTRE TLRQSEEKLR EIIDNMAEGL IVIDAETAGL SWNRRALEMY DFKEEMDAIK TFETTAPKIE LRTLEGELLP TEQWPIRRVM RGEELHDVEL LVRNKEQAWQ RIYSYRGATI RDAQGKLQMG VLTLRDITVK RQAQEALRES EEKFRAVFEQ AAVGMGRVTF GDARWIDVNG AFCNMLGYSR EEMLATPWPE MTHPDDLDLD LVPFRKMSAG ELNSYSVEKR FLHKTGRYVW ARLTLSLVRD RVGAPYFEVA IIEDITRRKE AEEALRKAKD ELELRVRERT AELEQAYVAL QRETDQRLAA VEDLREKEQL LMRQSRLAAM GEMLGNIAHQ WRQPLNVLGL HVQQLQLTYE VGELSGEFLT GEVAKVMELI RHMSDTITDF KDFLKEEKEP QPFNVNAAVA ATLTLLEAPL KAMRVDLRIE QTDELVVIGH RNEFSHVIMN LVNNAREALN ERAVATPRIW IRLFKDGGRS VVTVTDNAGG VPEEIQQRIF EPYFTTKGPD KGTGIGLYMS KNIIEKSMGG RLYVRNTAEG AEFRIELPG
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