Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0419 |
Symbol | |
ID | 8135728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 492371 |
End bp | 493501 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644868037 |
Product | zinc finger SWIM domain protein |
Protein accession | YP_003020257 |
Protein GI | 253699068 |
COG category | [S] Function unknown |
COG ID | [COG4279] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 97 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGTT TTTACGAATG GTATCCCCCT TACGTTTCCG TGGCGGAGAG GCGCGCCAAT GCGAAAGCCG AGATGGAGAA GTTGCGCAAG AAGAAGGGGG TGAACGTCCA GCCGGTGGAG ATCTCCGGGC GCACCATCGC CTCATCCTTC TGGGGTAAGG GGTGGTGCGA TCATATAGAG TCCTTCCACG ACTACGCCAA CCGCCTGCCG CGCGGACGCT CCTACGTGAG AAACGGCTCG GTCTGCCACC TGGAAATAAA GCCGGGAAGC ATCGAGGCGC TGGTGAGCGG TTCGATGCTT TACAACGTCG CCATCACCAT CGCCCCGATC TCGCAGGCTA AATGGAACGC CGTCAAGGCC GCCTGCGCGG GCCAGATAGG CTCCCTCATC GACCTGTTGC GCGGCAGACT CGCCAGCGGC GTCATGGAAG TGGTGTCCCA TCGGAGCACC GGCCTCTTTC CACTGCACAA AGAGATCCGC TTCAGCTGCG ATTGCCCCGA TTCCGCCAAG ATGTGCAAGC ACATAGCAGC CGTTCTTTAC GGAGTGGGGG CGCGTCTGGA TCACGCGCCG GAGAAGCTTT TCCATCTGAG AGGCGTGAAC CACGAAGAGA TGGTGGACGT GGCGAGCACG ATAGGTGTGG CGACCGGTGC GGGGAGTTCC CGGCGCCGGT TGGCAGCGAC AAGTCTGGAC GACATCTTCG GCATCGACCT GGCGGGGGGC GGATCGGAGA GCGCAGACGC GGCAGAGGCC AAGGATGCGC CGATTCCGAA GGCGAAAAAA CCCGTGGCGG CCCGTCCTGC CACCGCAAAA AAAGAAGCGA AGACAGAGGC GCAAAAAGCG ACACAGATGG GAGCGGCGCT ACCGGTTAAG GAGGTAAAAG TACGCGCGAA GGTAGTAGTT GAGACACCTC TTGTGGCGCC CACCACGTCG ACACCGTTTC CAAGACGTCT CACCGGGAAA GTAATCCTTA CCTGGCGCAG TTCCCTGCGA GAGACCCAGG CGGAGTTCGC CTCACGGATC GGCGTTTCCG CCGGATGTAT CTCGCAGTGG GAGAAAAAGC TGAGACAGAC CCTTCAGGTG AGGGAGCGCG CGTTGGCTGC GCTGCAAAAG GCATGGGTCG ACACTCATTA G
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Protein sequence | MSRFYEWYPP YVSVAERRAN AKAEMEKLRK KKGVNVQPVE ISGRTIASSF WGKGWCDHIE SFHDYANRLP RGRSYVRNGS VCHLEIKPGS IEALVSGSML YNVAITIAPI SQAKWNAVKA ACAGQIGSLI DLLRGRLASG VMEVVSHRST GLFPLHKEIR FSCDCPDSAK MCKHIAAVLY GVGARLDHAP EKLFHLRGVN HEEMVDVAST IGVATGAGSS RRRLAATSLD DIFGIDLAGG GSESADAAEA KDAPIPKAKK PVAARPATAK KEAKTEAQKA TQMGAALPVK EVKVRAKVVV ETPLVAPTTS TPFPRRLTGK VILTWRSSLR ETQAEFASRI GVSAGCISQW EKKLRQTLQV RERALAALQK AWVDTH
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