| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0408 |
|---|
| Symbol | hemC |
|---|
| ID | 8135716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 482766 |
|---|
| End bp | 483722 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644868026 |
|---|
| Product | porphobilinogen deaminase |
|---|
| Protein accession | YP_003020247 |
|---|
| Protein GI | 253699058 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0181] Porphobilinogen deaminase |
|---|
| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 80 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTGA AAGAGCTGAG AATAGGTACC CGCGCGAGCC AGCTCGCACT CTGGCAGGCA
AACTGGGTCA AATCCGAGCT GGAAAAACGC TACCCGGACA TGACCGTCAC CCTCACCAAG
ATCAAGACCA TCGGGGACAA GATCCTCGAC GTGCCCCTGG CTCAGGTGGG CGGCAAGGGC
CTGTTCGTGA AGGAGATCGA GGAGGCGATG CTGCGCGGCG AGATCGACAT CGCGGTGCAC
AGCATGAAGG ACGTGCCGAC CGAATTCCCC GAGGGGCTCG GCCTTTACTG CATCACCGAG
CGTGAAGATC CGCGTGATGC CGTCATCTCC AACAACGTGA AGTTCGCCGA CCTGCCGCAG
GGCGCGCGCA TCGGCACCTC GGCGCTCAGG CGCCAGGCGC AGCTTCTCAA GGTGCGTCCC
GACCTCGAGA TGGTCATCAT CCGCGGCAAC GTGCAGACCC GCATGGACAA GCTTAAGACC
GAAGGGCTGG ATGCCGTCAT CCTCGCCGCG GCCGGCCTGA ACCGCCTGGG CTTTGCCGAT
CAGATCACCG AGCTGCTGCC GACCGATCTC TCCCTCCCCG CCATCGGCCA GGGGGCGCTG
GGCATCGAGT GCAACCTCTC CAACCAGGAT GTGAAGGACG CCATCTCCTT CTTCAACCAC
CCCGATACCA GCCGCGCTGT CCGCGCCGAG CGCGCCCTCT TGTGGCGCTG CGAGGGCGGC
TGCCAGGTTC CCATCGCCGC CTTCGGCGAA GTGACCGGCG ACGAATTGAA GCTGACCGGT
TTCATCGCCT CCGTCGACGG CAAGGTTTCC GTCAAGGGAG TCGTGACGGG GCCTGCCGAC
GACTGCGAGA AGCTGGGCGT GAAGCTCGCC GAGCAGCTCC TCTCCGAAGG TGGCCACGCC
ATCCTCGCCG AGGTGTACCA GCGTGAAGTC TCCAGGGAGA AGGAAATCCC GGTATAA
|
|---|
| Protein sequence | MALKELRIGT RASQLALWQA NWVKSELEKR YPDMTVTLTK IKTIGDKILD VPLAQVGGKG
LFVKEIEEAM LRGEIDIAVH SMKDVPTEFP EGLGLYCITE REDPRDAVIS NNVKFADLPQ
GARIGTSALR RQAQLLKVRP DLEMVIIRGN VQTRMDKLKT EGLDAVILAA AGLNRLGFAD
QITELLPTDL SLPAIGQGAL GIECNLSNQD VKDAISFFNH PDTSRAVRAE RALLWRCEGG
CQVPIAAFGE VTGDELKLTG FIASVDGKVS VKGVVTGPAD DCEKLGVKLA EQLLSEGGHA
ILAEVYQREV SREKEIPV
|
|---|
| |