Gene GM21_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0405 
Symbol 
ID8135713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp479697 
End bp480371 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content61% 
IMG OID644868023 
Productsiroheme synthase 
Protein accessionYP_003020244 
Protein GI253699055 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 
TIGRFAM ID[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCTACT ACCCGATAAA TGTCGACCTG CATGGCCAGA GCGTGGTGAT CGTGGGGGGC 
GGGAAGGTCG CGGCCAGAAA GACGAAGAGG CTTTTAGCAG CCGGCGCCCG TCTCACCGTG
GTCGCGCCCG TACTCGCGCC GGTGCTTGCG GAGCTTGCCG AGCAGGGGGC GCTGCGGCAC
CTGCAAAGGG AGTATCGCCA CGGCGACCTG GCCGGAGCCT TGCTCGCCTT CGCCGCCACC
GACGATCCGC AGTTGAACCG TGAGGTTGCT GCCGAGGCGA AGGAGCGCGG CATCCTGGCC
GACGTTGTGG ACGCGCCGGC TCAAGGAGCC TTCACCACCC CCGCCGTACT GGAACAGGGA
GACCTTGTGA TCACTGTTTC GACAGGGGGT GCCAGCCCTG CCCTGTCACG ACAGATCGTC
GCTATGATCG AGCCGCTTTT CGGTCCTGAA TATGCCGAAG CGGTATCGCT TTTAGGTACT
GCCCGTGAAA AGCTATTGAC TGAAAAGGTG GGGAACGCAT ACAATGACCC GGTTTTTGCC
GAGCTGGCAG CGCTGAATCT TCCCGCGCTG ATCAAAAACG GGCAGAGAGA TGTAATAGAC
CAGATACTCC TGAAGCTCTC CGCTACCGGG GCTCGACCTG GCCCGGATGG GGCTGATAAA
AAGGAACCGT CATGA
 
Protein sequence
MRYYPINVDL HGQSVVIVGG GKVAARKTKR LLAAGARLTV VAPVLAPVLA ELAEQGALRH 
LQREYRHGDL AGALLAFAAT DDPQLNREVA AEAKERGILA DVVDAPAQGA FTTPAVLEQG
DLVITVSTGG ASPALSRQIV AMIEPLFGPE YAEAVSLLGT AREKLLTEKV GNAYNDPVFA
ELAALNLPAL IKNGQRDVID QILLKLSATG ARPGPDGADK KEPS