Gene GM21_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0399 
Symbol 
ID8135707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp474384 
End bp475259 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content65% 
IMG OID644868017 
Productlipoyl synthase 
Protein accessionYP_003020238 
Protein GI253699049 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value0.661131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCGA TCAGAAAACC GGCCTGGCTG CAGAAGAAGA TCACCCCCGC AGCCCATGCG 
GAGATGGAGG GGCTTCTAAA GGAGCTGCGC CTGAACACGG TGTGCCAGCA GGCGCGCTGC
CCCAACATCA CCGAATGCTT CGGCAAGCGC CAAGCGACCT TCCTCATTCT CGGGCGTATC
TGCACGCGCC TCTGCTCGTT TTGCTCCGTC TCGAAGGAAA CCCCGCTTCC CCTGGAACCC
GGTGAGGCGG CTTCCGTCGC GGAGGCGGTG AAGCGGCTGG GGCTCTCCCA CGTGGTGATC
ACCAGCCCCA CCCGCGATGA TCTTTCCGAC GGCGGCGCCT CGGTCTATGC CGAGACCGTG
GCTCGGATCC GGAGCGTTTC CCCGCGAACC AAGGTCGAGC TGCTGATCCC CGACTTTCGC
GGGGAGCGGG CGGCGCTCGC CGCGGTGGTC GAGAGCGCCC CCGACATCCT GGGGCATAAC
CTGGAGACGG TGCCGCGGCT TTATTCCATC CGCAGTGGCG CGGACTACCA GAGATCCCTC
GATTTGCTGG CACAGGCGCG GCGGATGGCC CCCGACCTCA ACACCAAGTC CGGCCTTATG
CTGGGCCTAG GCGAAGAGGA AGCGGAACTG TATGCCGTCA TGGAGGATCT GCTGAAGGCG
GGGTGCGGCT ACCTGAGCCT GGGGCAGTAC CTGGCGCCCA GCCGGATGCA TCATCCGGTG
CAGCGTTACG TCGAGCCCGA ACTGTTCGAG AAATACAAGG AGAAGGCGCT CGCGATGGGG
TTCGAGCATG TGGAGAGCGC CCCCTACGTA AGAAGCAGCT ACCACGCGGA GAATTACCTG
GAAGTCAAGT CCCCGCCCCC GGAGGGGGAG GGTTAG
 
Protein sequence
MDPIRKPAWL QKKITPAAHA EMEGLLKELR LNTVCQQARC PNITECFGKR QATFLILGRI 
CTRLCSFCSV SKETPLPLEP GEAASVAEAV KRLGLSHVVI TSPTRDDLSD GGASVYAETV
ARIRSVSPRT KVELLIPDFR GERAALAAVV ESAPDILGHN LETVPRLYSI RSGADYQRSL
DLLAQARRMA PDLNTKSGLM LGLGEEEAEL YAVMEDLLKA GCGYLSLGQY LAPSRMHHPV
QRYVEPELFE KYKEKALAMG FEHVESAPYV RSSYHAENYL EVKSPPPEGE G