Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0397 |
Symbol | |
ID | 8135705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 470751 |
End bp | 471650 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644868015 |
Product | cytochrome C family protein |
Protein accession | YP_003020236 |
Protein GI | 253699047 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01905] doubled CXXCH domain [TIGR03508] decaheme c-type cytochrome, DmsE family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 0.265526 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAA GATTAGTACC AAAGAAGCTG TTTCTGCTTA GTGCAATTGT CGGATGCCTG CTTTCGTTCG GTGCGTTCGC CTTTGCCGTA GACAGTGCCC CGGCCGGAGG CGAGAAGTGC AAAGAATGTC ACACCGCCGT AGTCCAGGAG TTCTCCGGCA ACGTGCACTC GAAGGCTGGG GCCTACGGCT TCGCCGGCGC TAGCTGCGAG TCCTGCCACG GCGCCAGCGC TTCCCATGCA AGCTCCGGCG ATGTTGCCGC GATCAGCAAC CCTGCCAAGA TCGACGTCGA AGCCGCTTCT GCCGGCTGCC TCAACTGTCA CTCCAAGGGG AAAGGTCTCG CCCTGTGGCA CGGCAGCATC CACGAGTCCC AAAAGCTTGC CTGCGTCGCC TGCCACAAGA TCCACGGCAA TAATGACAAG CTCCTCTCTA AGAAAACCGA GGCGGAGGTC TGCATCAGCT GCCACGTCGA TGTGCGCGCC GACATGTTCA AGCGTTCCAA GCACCCGATG CGTGACGCGT CCTCCCCTTC CGGCGAAGGG AAGATGACCT GCTCCTCCTG CCACAACGTC CACGGCGCCA AAGGCGAGAA GCTGATCGAC GCCAAATCCT TCAACGACAA GTGCTACGAA TGCCATCAGG AGAAAAAGGC TCCGCTGCTT TGGGAGCACT CCCCGGTGAA GGAAGATTGC ATGACCTGTC ACACCCCCCA CGGTTCCTCC AACGACAAGA TGCTCGTTAC CAAGGTGCCG CGCCTTTGCC AGCAGTGCCA TATGCAGGGA CGCCACCAAA GCGGCACCCT GGGTATGAAC TCGACCTTCG CCGTCAACAG GGGGTGCCTG AACTGCCACT CGCAGATCCA CGGCTCCAAC AACCCGTCCG GCGCGGTACT GCAGCGCTAG
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Protein sequence | MSKRLVPKKL FLLSAIVGCL LSFGAFAFAV DSAPAGGEKC KECHTAVVQE FSGNVHSKAG AYGFAGASCE SCHGASASHA SSGDVAAISN PAKIDVEAAS AGCLNCHSKG KGLALWHGSI HESQKLACVA CHKIHGNNDK LLSKKTEAEV CISCHVDVRA DMFKRSKHPM RDASSPSGEG KMTCSSCHNV HGAKGEKLID AKSFNDKCYE CHQEKKAPLL WEHSPVKEDC MTCHTPHGSS NDKMLVTKVP RLCQQCHMQG RHQSGTLGMN STFAVNRGCL NCHSQIHGSN NPSGAVLQR
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