Gene GM21_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0396 
Symbol 
ID8135704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp469023 
End bp470384 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content62% 
IMG OID644868014 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003020235 
Protein GI253699046 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.262789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAAAG CAAAGCTGCT CATGGTGGAG GACGACCGAC TTCTGGGGGA CCTGATGCAG 
GAGTCGCTGG AGGAAGCGGG GTACCAGGTG CGCCTTGCGC GCAGCGGCGC CGAAGCGCTG
GAGGCGGTGA GCGAGGAGAG TTTCGACCTG GTGCTGCAGG ACATACAGCT TCCAGACGCC
GACGGCCTGG ACGTGCTGGA GGAGATCCTG CGCCGGCAGC CGCAGTGGAA GGCACTGGTG
ATGACGGCCT TCGCCACTGT GGACCGCGCC GTGAAGGCGA TGAAGATCGG AGCTTTCGAC
TTCCTGATCA AGCCGTTCGC CATGGACATG CTCTTTCTGA AGCTGGAAAA GGTGCTGGAA
TTCCGGCAGA TGGAAAAGGA GGTCGCCGCC CTGAAGGAGG GGGAGGAGCC GAAACTGGTG
ACGCGCAGTC CGGCCATGGC CGGTGTGCTG GAGATGGTGC GCGTTGCCGC CCCCACCGAC
GTCGCCGTGC TTCTTCTGGG GGAAAGCGGA ACCGGCAAGG AGCTCCTGGC GGACCTGGTG
CATGCGCAGA GCAAGAGGGC GCGCAAGCCG ATGGTGAAGA TCAACTCCGC GGCCATTCCG
GAAAACCTGG TGGAGAGCGA ACTCTTCGGC GTGGAGCGGG GCGCCTATAC CGGAGCCGAT
CGAACCCGCC CGGGGTACGT CGAGATGGCG GCCGGGGGAA CCCTGTTCCT GGATGAAATC
GGAGACCTGC CGCTCTCCCT GCAGGGGAAA CTCCTGCGGG TCCTGCAGGA GAAAACGACC
TACCGCGTCG GCGGGAACAA GGAGATTCCG GTCGACTTCC GCCTGGTCGC CGCCACCAAT
TGCAACCTGC GCCAACTGGT GGAACAGAAG AAATTCCGCG AGGATCTCTA CTATCGCATT
AGCGTAATGC CCATCGATAT CCCCCCCCTC AGGGAGAGGA GGGAGGATAT TCCGCTGCTC
ATCGCCACCT TCCAAAAGCG GTTAGCCGCG GCAGGGGTCG GGGGGGCGGT CGAGTTCACT
CCTGAGGCGC TGGAACGGCT GCGTAACTAC GATTTCCCCG GCAACATCAG GCAGTTGAAG
AACATCGTCG AGCAGCTAAC CATCCGCTTT CCGGGTGATA CCATCAAGGC CAGGCAGATC
CCGGTCTCCC TTGGCAGCGA CTCCTGGGTC GGGAGCCTGT TCGAATGCTT CAGCGTGGAT
AAGCCGCTCA AGGAGGCGGT GCAGGAGTTC GAGGACAGGT ACATCGCCAA GGTCCTCAAA
AGCACCGGCG GAAACAAGAC CAAGGCTGCC GACCTGCTCG GAATGTCGCG TCAGATGCTC
TGGGAGAAGA CCAAGCGTCA GGACCACTCA GACGCCCCGT GA
 
Protein sequence
MVKAKLLMVE DDRLLGDLMQ ESLEEAGYQV RLARSGAEAL EAVSEESFDL VLQDIQLPDA 
DGLDVLEEIL RRQPQWKALV MTAFATVDRA VKAMKIGAFD FLIKPFAMDM LFLKLEKVLE
FRQMEKEVAA LKEGEEPKLV TRSPAMAGVL EMVRVAAPTD VAVLLLGESG TGKELLADLV
HAQSKRARKP MVKINSAAIP ENLVESELFG VERGAYTGAD RTRPGYVEMA AGGTLFLDEI
GDLPLSLQGK LLRVLQEKTT YRVGGNKEIP VDFRLVAATN CNLRQLVEQK KFREDLYYRI
SVMPIDIPPL RERREDIPLL IATFQKRLAA AGVGGAVEFT PEALERLRNY DFPGNIRQLK
NIVEQLTIRF PGDTIKARQI PVSLGSDSWV GSLFECFSVD KPLKEAVQEF EDRYIAKVLK
STGGNKTKAA DLLGMSRQML WEKTKRQDHS DAP