| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0389 |
|---|
| Symbol | |
|---|
| ID | 8135697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 461183 |
|---|
| End bp | 462274 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644868007 |
|---|
| Product | glycine cleavage system T protein |
|---|
| Protein accession | YP_003020228 |
|---|
| Protein GI | 253699039 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
|---|
| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 0.65951 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATC TCAAGGCGAC ACCGCTTAAA GCCCACCACG AGGGGCTCAA GGCGCTGATG
GCTCCCTTCG GGGGATGGCT GATGCCGATC CAGTACGAGG GGATCATCGC CGAACACAGG
TGGTGCCGAG AAAAAGCGGC GCTTTTCGAC ATCTGCCACA TGGGCGAGTT CCGGTTCCGG
GGCGACATCC AGGCCGGCGG TCTCGAGGAC GTCTTCACCT TCTCGGTCAA GGGGATCCCG
ATCGGGCGCT CGCGCTACGG GTTCCTGCTG AACCAGTCGG GGGGGGTGAT CGACGACCTG
ATCGTCTTCA GGCTGGCGGA GGACGAGGTG ATGATCGTGG TAAACGCCGC GACCGCGCCC
AACGATTTCA AGGTGATCGC CTCGCGCCTG AAGGAGCCGG CGCAACTGGT CGACATCTCG
GCGCAGACCG GAAAGCTGGA CCTCCAGGGG CCGCTCTCCC GCGAGGTGCT GATGGAACAT
CTCGGGAGCG AACTCGGCGC GCTTCCCTTC TTCAAGTTCA CCAGGACCCG CGTCCTCGGA
GAGGACGCCA TCGTGAGCCG GACCGGATAC ACCGGCGAAC TTGGTTACGA GATCTTCCTC
CCCAGCGGCA AGACGGCGGA ACTGTGGGAA CTCCTGCTCA AGGACCCGAG GGTGGCCCCC
GCAGGATTGG GCGCCCGCGA CCTGTTGCGG CTGGAGATGG GGTACTCGTT GTACGGCAAC
GACATCGACG AAAAGATCTC TCCGATCGCA GCGGGGCTCA CCGCATTCGT TAACCTGGAC
AAGGATTTCG TCGGCAAGGA TGCGCTCCTG AGGGAGCGGG AAGCGGGGCC GGAAAACGTG
AAGGTCGCCT TCCGCGTCGA CTCCCGCCGC TCTCCGCGCC ACTTTTACGA AATCCTGCAC
CAGGGGGCGC CGGTGGGGAT GGTGACCAGC GGCGCCTTTT CCCCCATGCT TTCCTGCGGC
ATCGGGATGG GGTACGTGAA GCCTCAAGCC GCGGCGCTGG GGACCAGGCT CACCATCAAG
CACGAGCGGG TAGAGATGGA GGCCCAGGTG GTCGACCTTC CCTTCTACAG TGGAGGCTCG
TTGAGAGCGT AA
|
|---|
| Protein sequence | MEDLKATPLK AHHEGLKALM APFGGWLMPI QYEGIIAEHR WCREKAALFD ICHMGEFRFR
GDIQAGGLED VFTFSVKGIP IGRSRYGFLL NQSGGVIDDL IVFRLAEDEV MIVVNAATAP
NDFKVIASRL KEPAQLVDIS AQTGKLDLQG PLSREVLMEH LGSELGALPF FKFTRTRVLG
EDAIVSRTGY TGELGYEIFL PSGKTAELWE LLLKDPRVAP AGLGARDLLR LEMGYSLYGN
DIDEKISPIA AGLTAFVNLD KDFVGKDALL REREAGPENV KVAFRVDSRR SPRHFYEILH
QGAPVGMVTS GAFSPMLSCG IGMGYVKPQA AALGTRLTIK HERVEMEAQV VDLPFYSGGS
LRA
|
|---|
| |