Gene GM21_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0325 
Symbol 
ID8135632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp402897 
End bp406112 
Gene Length3216 bp 
Protein Length1071 aa 
Translation table11 
GC content66% 
IMG OID644867942 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionYP_003020164 
Protein GI253698975 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.00559956 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGCTGA AGATATATAC CAGCAACCGC ATGGAACGCC TGGTGGACGA GCTGGAAAGG 
GTGGTCCGCG CCCCCCGTCC CGCCCCCTGC ACCCCCTTCG ACAAGGAACT GATCGTGGTG
CAGAACAAGG GGATGCAGCG CTGGCTCTCC ATGGAGCTCG CCGCACGCAT CGGTGTCTGG
GCCAACGGCG AATTCCTCTT TCCCAACAAG TTCGTGCAAG AGGTCTTCGC CCACGTGCTC
CCGGAGAGCC CCGCGGACGC TCCGCTTTTC GCCCCGGAGG TGATGACCTG GAGGATCCTG
GGGCTGCTGC GGCATTCGGC GGGAAGAGCC GGCTTCGAGG AGGTCGCCGG GTACCTGGCG
GACGACGGGG ACGGCCTCAA GCGGATGCAG TTGGCCCGGC GCATCTCCGA CACCTTCGAC
CGGTACACCA TCTACCGTCC CAAGGAGCTG CTCCGCTGGG AGCAGGGGGA AGAGGAACAC
TGGCAGGCGC AGCTTTGGCG GGCCCTCCAC GAGGGCACCG GGCAGAAGCA CCGCGCCAGG
CTGCTTCACG ATTTTCTCGC TTCCCGCAAA AACGACCGCT CCTGGCGGCG GCGCATCTCG
GTTATCGGCA TTCCCTCGCT TCCCCCCTTC CACCTCGACG TCCTCGCCAA GGTGGCGGAG
CACGCCGAGG TGAACCTCTT CCTCTTGAAC CCCTGCCGCC AGTACTGGGG CGAGATCGTC
TCCGAGCGGG AGCTGGCCCG ACTGGAGAAG CACGGTCAGG GGGAGGAGCA GTGGTACGAG
ACGGGAAACC CGCTCCTTGC CTCGTGGGGG AAGCTCGGCC GCGACTTCTT CAAGGCGATC
ATCGACGACT GCGGCGACCA CGAAAGGGAA GACAGCTTCT ACGAGCTGCC GCAGGGGATT
CTGCTGCACG AAGTCCAGGC GGACATCGTG GAATTGCGGG GAGCCGAGGC GGGGCCGCGA
CAGGTGCAGG CGGGCGACCT CTCCCTCAAG GTGCACTCCT GCCACTCCCC CATGCGCGAG
GTGGAGGTTC TCTACGACAC GCTTCTCTCC CTTTTCGACG CCGATCCCCT GCTGTCCCCC
CGCGACGTGC TGGTGATGAC CCCCGACATC GAAGCTTACG CCCCCTACAT CTCGGCCGTC
TTCGACAACC CGGAAGAAGA TCGAAAGCGC ATCCCCTATT CCATCGCGGA CAGAAGCCTC
AAAAACGAGG GGGAGGCGGC ACGTGCGCTT GTCGCCATCT TAGGGCTTTG CGGCGGCCGC
TATGGGGTGG CGACCGTGCT GGATATCCTG GAGTCCCCCC CGGTGGCGCG CCGGTTCGGG
CTCTGCGGCG ACGACCTGGA AAACGTGCGG GACTGGCTCA GGGGGGCCAA CATCAGGTGG
GGCATCGACG CCGCCCAGCG CGCGGAGCAC GGCGTCCCCC CCTTCAGCGA GAACTCGTGG
TCCGCGGGGC TCGACCGGCT GCTTCTGGGC TACGCCATGA ACGGCGACGG GCGCTCGTTC
TACGACGGCA TACTCCCCTA CGACGACATG GAGGGGGGCG TGGCGCTCTC CTTCGGGCGC
TTCCTCGCCT TCTGCGAAAA GCTTTTCGCC CAAACCGGGG CGCTTTCCCG TCCGCGCGTG
CCGTCCGAGT GGGTGCCGGC GCTGCGCCGG ATCCTGGACG ACTTCATCCT CCCGGACCAG
GAAGGGGAGC GCGAGTTCCT CCTCCTGATA GAGATGGCGA AGAAACTGGG TGAGTCCCCC
GCCGTCGCCG GTTTCGAGGA AGAGATCGGC ATCGAGGTGG TGCGCTACTG GGTCGAGCAG
CAGTTGGGGG CCTCGAAACG GGATCTCGGT TTTCTGACCG GCAACGTCAC CTTCTGCGCC
ATGCTCCCGA TGCGGAGCAT CCCCTTTCCG GTGGTCGCCC TTTTGGGGAT GAACGAGGGG
GAATTCCCGC GCCGCAACCC GCCCCAGGGG TTCGACCTGA TGACCCGCGA GCCCCGTTCC
GGGGACTCTT CCCCGCGCGA CGAGGACCGC TACCTGTTCC TGGAGGCCCT CCTCTCCGCA
CGCAAGAGGC TGCACATAAG CTACGTGGGG CAGAGCATCA AGGACAACGC CGAGCTCCCC
CCGAGCGTGC TGGTGAGCGA ACTTCTGGAC TACCTGGAAC GCTCTTTCGT CGCGCCGCAG
GGTAAGCCGG CCGCGGAAGT AGCGCACCAC CCGCTGCAGC CTTTCAGCCC CAAATACTTC
TACCGCGACT GCGCCCTTTT CAGCTACTCG CGGCAAAACT GCGAGGGGGC AAGAGCGAAG
CTCTCCCCCC CCTCTCCTCG GGAGCCGTTT CTGGATGCGC CCCTTCCCCC CTGGGAGGAA
GCGGGGACGG TCACGCTCAA GGCGCTCATC GATTTCCTCT GCAACCCCGC CAAGGAATTG
CTGCGGCGCC GGCTCGGCAT CCGCATAGAG CAGGGAGTTG AGCCGCTGGA GGAATCGGAG
CCCTTCGCTC TGGACAGCCT CGCCAAGTAC CAGCTGGAGC AGGAGATGGT CACGGCGCTC
TTGCGCGGGG AGGAGCTGGA CATCCCTTAC GCCGTCGCCT GCGCGCGCGG CGACCTTCCT
CCCGGAGTCT GCGGCTCCGC CCTTTTCCGC AAGCTGGGGG AACCGGCGCA GGAGTTCGCC
GCCAAGGTGG TCGAGGTGTC GGACGGCGAG CCGCTCCCTC CCTTGGACAT CGACCTGGTA
CTTCCCGGCG GGAGGATCGT CGGGCGCATC GAAAACCTCC GTTGCGACCG CATGGTGCGC
TACCGCTACA CCAAGCTGAA GGCGAAAGAC CAGCTGCGGC TCTGGGTCGA GCACCTGGCA
CTCAACTGCG CCCAGGCCGA GGGGTATCCG CTGGAGAGCA GCTTCGTCGC ATCGGACAGC
ACCATCCACC TCCCCCCCGT CGAGACATGC ACGGAGCACC TGGACCGGCT CCTGGAGCTG
TACCGAATGG GGATGACCTG CCCGCTCAAG TTCTTCCCGG AGAGCTCTCT GGAGTACGCC
AAGAAGTCGC GCGATCCGAA GAAGGCGGCG AAGGCGCTCG CCGATGCCCT GGGCAAGTGG
CACGGCAGCG AATTTTACGA GGGCGAGGGG AAGGACGAGC ACTGCCGCCG CTTTTTCGGC
GACGACGCCC CGCTGGACGA GGAATTCGCG GCCCTCGCGC TCCAGGTATG GGAGCCGCTC
CTGGAGCACC AGGGGGCCAA GGGTAAAGGC AAATGA
 
Protein sequence
MPLKIYTSNR MERLVDELER VVRAPRPAPC TPFDKELIVV QNKGMQRWLS MELAARIGVW 
ANGEFLFPNK FVQEVFAHVL PESPADAPLF APEVMTWRIL GLLRHSAGRA GFEEVAGYLA
DDGDGLKRMQ LARRISDTFD RYTIYRPKEL LRWEQGEEEH WQAQLWRALH EGTGQKHRAR
LLHDFLASRK NDRSWRRRIS VIGIPSLPPF HLDVLAKVAE HAEVNLFLLN PCRQYWGEIV
SERELARLEK HGQGEEQWYE TGNPLLASWG KLGRDFFKAI IDDCGDHERE DSFYELPQGI
LLHEVQADIV ELRGAEAGPR QVQAGDLSLK VHSCHSPMRE VEVLYDTLLS LFDADPLLSP
RDVLVMTPDI EAYAPYISAV FDNPEEDRKR IPYSIADRSL KNEGEAARAL VAILGLCGGR
YGVATVLDIL ESPPVARRFG LCGDDLENVR DWLRGANIRW GIDAAQRAEH GVPPFSENSW
SAGLDRLLLG YAMNGDGRSF YDGILPYDDM EGGVALSFGR FLAFCEKLFA QTGALSRPRV
PSEWVPALRR ILDDFILPDQ EGEREFLLLI EMAKKLGESP AVAGFEEEIG IEVVRYWVEQ
QLGASKRDLG FLTGNVTFCA MLPMRSIPFP VVALLGMNEG EFPRRNPPQG FDLMTREPRS
GDSSPRDEDR YLFLEALLSA RKRLHISYVG QSIKDNAELP PSVLVSELLD YLERSFVAPQ
GKPAAEVAHH PLQPFSPKYF YRDCALFSYS RQNCEGARAK LSPPSPREPF LDAPLPPWEE
AGTVTLKALI DFLCNPAKEL LRRRLGIRIE QGVEPLEESE PFALDSLAKY QLEQEMVTAL
LRGEELDIPY AVACARGDLP PGVCGSALFR KLGEPAQEFA AKVVEVSDGE PLPPLDIDLV
LPGGRIVGRI ENLRCDRMVR YRYTKLKAKD QLRLWVEHLA LNCAQAEGYP LESSFVASDS
TIHLPPVETC TEHLDRLLEL YRMGMTCPLK FFPESSLEYA KKSRDPKKAA KALADALGKW
HGSEFYEGEG KDEHCRRFFG DDAPLDEEFA ALALQVWEPL LEHQGAKGKG K