Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0325 |
Symbol | |
ID | 8135632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 402897 |
End bp | 406112 |
Gene Length | 3216 bp |
Protein Length | 1071 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644867942 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_003020164 |
Protein GI | 253698975 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.00559956 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGCTGA AGATATATAC CAGCAACCGC ATGGAACGCC TGGTGGACGA GCTGGAAAGG GTGGTCCGCG CCCCCCGTCC CGCCCCCTGC ACCCCCTTCG ACAAGGAACT GATCGTGGTG CAGAACAAGG GGATGCAGCG CTGGCTCTCC ATGGAGCTCG CCGCACGCAT CGGTGTCTGG GCCAACGGCG AATTCCTCTT TCCCAACAAG TTCGTGCAAG AGGTCTTCGC CCACGTGCTC CCGGAGAGCC CCGCGGACGC TCCGCTTTTC GCCCCGGAGG TGATGACCTG GAGGATCCTG GGGCTGCTGC GGCATTCGGC GGGAAGAGCC GGCTTCGAGG AGGTCGCCGG GTACCTGGCG GACGACGGGG ACGGCCTCAA GCGGATGCAG TTGGCCCGGC GCATCTCCGA CACCTTCGAC CGGTACACCA TCTACCGTCC CAAGGAGCTG CTCCGCTGGG AGCAGGGGGA AGAGGAACAC TGGCAGGCGC AGCTTTGGCG GGCCCTCCAC GAGGGCACCG GGCAGAAGCA CCGCGCCAGG CTGCTTCACG ATTTTCTCGC TTCCCGCAAA AACGACCGCT CCTGGCGGCG GCGCATCTCG GTTATCGGCA TTCCCTCGCT TCCCCCCTTC CACCTCGACG TCCTCGCCAA GGTGGCGGAG CACGCCGAGG TGAACCTCTT CCTCTTGAAC CCCTGCCGCC AGTACTGGGG CGAGATCGTC TCCGAGCGGG AGCTGGCCCG ACTGGAGAAG CACGGTCAGG GGGAGGAGCA GTGGTACGAG ACGGGAAACC CGCTCCTTGC CTCGTGGGGG AAGCTCGGCC GCGACTTCTT CAAGGCGATC ATCGACGACT GCGGCGACCA CGAAAGGGAA GACAGCTTCT ACGAGCTGCC GCAGGGGATT CTGCTGCACG AAGTCCAGGC GGACATCGTG GAATTGCGGG GAGCCGAGGC GGGGCCGCGA CAGGTGCAGG CGGGCGACCT CTCCCTCAAG GTGCACTCCT GCCACTCCCC CATGCGCGAG GTGGAGGTTC TCTACGACAC GCTTCTCTCC CTTTTCGACG CCGATCCCCT GCTGTCCCCC CGCGACGTGC TGGTGATGAC CCCCGACATC GAAGCTTACG CCCCCTACAT CTCGGCCGTC TTCGACAACC CGGAAGAAGA TCGAAAGCGC ATCCCCTATT CCATCGCGGA CAGAAGCCTC AAAAACGAGG GGGAGGCGGC ACGTGCGCTT GTCGCCATCT TAGGGCTTTG CGGCGGCCGC TATGGGGTGG CGACCGTGCT GGATATCCTG GAGTCCCCCC CGGTGGCGCG CCGGTTCGGG CTCTGCGGCG ACGACCTGGA AAACGTGCGG GACTGGCTCA GGGGGGCCAA CATCAGGTGG GGCATCGACG CCGCCCAGCG CGCGGAGCAC GGCGTCCCCC CCTTCAGCGA GAACTCGTGG TCCGCGGGGC TCGACCGGCT GCTTCTGGGC TACGCCATGA ACGGCGACGG GCGCTCGTTC TACGACGGCA TACTCCCCTA CGACGACATG GAGGGGGGCG TGGCGCTCTC CTTCGGGCGC TTCCTCGCCT TCTGCGAAAA GCTTTTCGCC CAAACCGGGG CGCTTTCCCG TCCGCGCGTG CCGTCCGAGT GGGTGCCGGC GCTGCGCCGG ATCCTGGACG ACTTCATCCT CCCGGACCAG GAAGGGGAGC GCGAGTTCCT CCTCCTGATA GAGATGGCGA AGAAACTGGG TGAGTCCCCC GCCGTCGCCG GTTTCGAGGA AGAGATCGGC ATCGAGGTGG TGCGCTACTG GGTCGAGCAG CAGTTGGGGG CCTCGAAACG GGATCTCGGT TTTCTGACCG GCAACGTCAC CTTCTGCGCC ATGCTCCCGA TGCGGAGCAT CCCCTTTCCG GTGGTCGCCC TTTTGGGGAT GAACGAGGGG GAATTCCCGC GCCGCAACCC GCCCCAGGGG TTCGACCTGA TGACCCGCGA GCCCCGTTCC GGGGACTCTT CCCCGCGCGA CGAGGACCGC TACCTGTTCC TGGAGGCCCT CCTCTCCGCA CGCAAGAGGC TGCACATAAG CTACGTGGGG CAGAGCATCA AGGACAACGC CGAGCTCCCC CCGAGCGTGC TGGTGAGCGA ACTTCTGGAC TACCTGGAAC GCTCTTTCGT CGCGCCGCAG GGTAAGCCGG CCGCGGAAGT AGCGCACCAC CCGCTGCAGC CTTTCAGCCC CAAATACTTC TACCGCGACT GCGCCCTTTT CAGCTACTCG CGGCAAAACT GCGAGGGGGC AAGAGCGAAG CTCTCCCCCC CCTCTCCTCG GGAGCCGTTT CTGGATGCGC CCCTTCCCCC CTGGGAGGAA GCGGGGACGG TCACGCTCAA GGCGCTCATC GATTTCCTCT GCAACCCCGC CAAGGAATTG CTGCGGCGCC GGCTCGGCAT CCGCATAGAG CAGGGAGTTG AGCCGCTGGA GGAATCGGAG CCCTTCGCTC TGGACAGCCT CGCCAAGTAC CAGCTGGAGC AGGAGATGGT CACGGCGCTC TTGCGCGGGG AGGAGCTGGA CATCCCTTAC GCCGTCGCCT GCGCGCGCGG CGACCTTCCT CCCGGAGTCT GCGGCTCCGC CCTTTTCCGC AAGCTGGGGG AACCGGCGCA GGAGTTCGCC GCCAAGGTGG TCGAGGTGTC GGACGGCGAG CCGCTCCCTC CCTTGGACAT CGACCTGGTA CTTCCCGGCG GGAGGATCGT CGGGCGCATC GAAAACCTCC GTTGCGACCG CATGGTGCGC TACCGCTACA CCAAGCTGAA GGCGAAAGAC CAGCTGCGGC TCTGGGTCGA GCACCTGGCA CTCAACTGCG CCCAGGCCGA GGGGTATCCG CTGGAGAGCA GCTTCGTCGC ATCGGACAGC ACCATCCACC TCCCCCCCGT CGAGACATGC ACGGAGCACC TGGACCGGCT CCTGGAGCTG TACCGAATGG GGATGACCTG CCCGCTCAAG TTCTTCCCGG AGAGCTCTCT GGAGTACGCC AAGAAGTCGC GCGATCCGAA GAAGGCGGCG AAGGCGCTCG CCGATGCCCT GGGCAAGTGG CACGGCAGCG AATTTTACGA GGGCGAGGGG AAGGACGAGC ACTGCCGCCG CTTTTTCGGC GACGACGCCC CGCTGGACGA GGAATTCGCG GCCCTCGCGC TCCAGGTATG GGAGCCGCTC CTGGAGCACC AGGGGGCCAA GGGTAAAGGC AAATGA
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Protein sequence | MPLKIYTSNR MERLVDELER VVRAPRPAPC TPFDKELIVV QNKGMQRWLS MELAARIGVW ANGEFLFPNK FVQEVFAHVL PESPADAPLF APEVMTWRIL GLLRHSAGRA GFEEVAGYLA DDGDGLKRMQ LARRISDTFD RYTIYRPKEL LRWEQGEEEH WQAQLWRALH EGTGQKHRAR LLHDFLASRK NDRSWRRRIS VIGIPSLPPF HLDVLAKVAE HAEVNLFLLN PCRQYWGEIV SERELARLEK HGQGEEQWYE TGNPLLASWG KLGRDFFKAI IDDCGDHERE DSFYELPQGI LLHEVQADIV ELRGAEAGPR QVQAGDLSLK VHSCHSPMRE VEVLYDTLLS LFDADPLLSP RDVLVMTPDI EAYAPYISAV FDNPEEDRKR IPYSIADRSL KNEGEAARAL VAILGLCGGR YGVATVLDIL ESPPVARRFG LCGDDLENVR DWLRGANIRW GIDAAQRAEH GVPPFSENSW SAGLDRLLLG YAMNGDGRSF YDGILPYDDM EGGVALSFGR FLAFCEKLFA QTGALSRPRV PSEWVPALRR ILDDFILPDQ EGEREFLLLI EMAKKLGESP AVAGFEEEIG IEVVRYWVEQ QLGASKRDLG FLTGNVTFCA MLPMRSIPFP VVALLGMNEG EFPRRNPPQG FDLMTREPRS GDSSPRDEDR YLFLEALLSA RKRLHISYVG QSIKDNAELP PSVLVSELLD YLERSFVAPQ GKPAAEVAHH PLQPFSPKYF YRDCALFSYS RQNCEGARAK LSPPSPREPF LDAPLPPWEE AGTVTLKALI DFLCNPAKEL LRRRLGIRIE QGVEPLEESE PFALDSLAKY QLEQEMVTAL LRGEELDIPY AVACARGDLP PGVCGSALFR KLGEPAQEFA AKVVEVSDGE PLPPLDIDLV LPGGRIVGRI ENLRCDRMVR YRYTKLKAKD QLRLWVEHLA LNCAQAEGYP LESSFVASDS TIHLPPVETC TEHLDRLLEL YRMGMTCPLK FFPESSLEYA KKSRDPKKAA KALADALGKW HGSEFYEGEG KDEHCRRFFG DDAPLDEEFA ALALQVWEPL LEHQGAKGKG K
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