| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0311 |
|---|
| Symbol | |
|---|
| ID | 8135618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 381143 |
|---|
| End bp | 383344 |
|---|
| Gene Length | 2202 bp |
|---|
| Protein Length | 733 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644867928 |
|---|
| Product | catalase/peroxidase HPI |
|---|
| Protein accession | YP_003020150 |
|---|
| Protein GI | 253698961 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0376] Catalase (peroxidase I) |
|---|
| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 191 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG ACAGTCAGTG CCCGGTAACA GGCAGAGCTA ACAAGCACGC AGCCAGAGTT
GGTAGAATGA ACCGGGACTG GTGGCCGAAT CAGTTGAACC TCAAGATTCT GCACCAGCAT
TCCCCCCTAT CCAATCCCAT GGGAGGTAAT TTTAACTATT CTGAAGAATT CAAGGCTCTC
GACCTGGCCG CAGTCAGGAA CGATATCTTC GAGTTGATGA CCAATTCGCA GGACTGGTGG
CCGGCCGACT ACGGCCATTA CGGCCCTTTG TTCATACGCA TGGCCTGGCA CAGCGCCGGC
ACCTACCGCA CCGGCGACGG CCGTGGCGGC GCAAGATCTG GTAGTCAACG CTTTGCCCCC
CTGAACAGTT GGCCCGACAA CGCCAACCTC GACAAGGCGC GCATGCTGTT ATGGCCGATC
AAGCAAAAAT ACGGCAAGAA GATCTCGTGG GCCGACCTGC TGATCTTCGC TGGTAACTGT
GCGCTTGAAT CTATGGGTTT CAAAACCTTC GGTTTCGGTG GCGGGCGCGA GGATATCTGG
GAACCAGGAG AGGACATATA CTGGGGGGCT GAAGACACCT GGCTGGGCGA CAAACGTTAT
TCCGGCGAGC GACTGCTGGA AAATCCGCTG GCCGCTGTTC AGATGGGTCT GATCTATGTG
AATCCCGAAG GGCCGAACGG CAACCCCGAT CCGCTGGCAG CGGCAAAGGA CATACGCGAG
ACCTTCGCTC GTATGGCGAT GAATGACGAG GAGACTGTGG CGCTCATCGC CGGTGGGCAC
ACCTTCGGCA AATGCCACGG CGCCGGCGCT GCAACGCATG TGGGGCCTGA GCCGGAAGGC
GCAAGCATCA TTGAACAAGG CTTGGGTTGG AAATGCAGCC TCGGCACCGG GAGAGGCGAG
CATACTATCA CAAGCGGTCT GGAGGGAGCC TGGACCACGA ACCCGGTGAA GTGGGACAAT
GGCTTCTTTG ACGTCTTGTT CAGCTATGAT TGGGCGCTCG CCAAAAGCCC GGCCGGCGCA
CATCAGTGGA TTCCAACCGA TCCCGCCGCA AAGGGCACCG TGCCGGACGC CCATAATCCC
GCCAAGCGGC ACGCGCCCAT GATGCTTACC ACGGACCTTG CCCTGAAGTT GGATCCGATC
TATGGGCCGA TTTCCAAGCG CTTCCATGAG CAGCCCGACT TGTTCGCAGA TGCGTTTGCC
CGGGCCTGGT TCAAGCTGAC GCACCGTGAC ATGGGACCGC GCGCCTGTTA TCTCGGCCCA
GAGGTTCCCG CTGAAGATCT GATTTGGCAG GACCCCCTCC CCGCGCGCAA TCACGAGCTC
ATTGACGATC AAGACATCGC TGAACTCAAG GGCAAGATCG TCACTTCGGG GCTGTCGGTC
TCACAGTTGG TTTCTACTGC TTGGGCATCT GCGTCCACCT TCCGCAGCTC CGACAGGCGC
GGTGGGGCCA ATGGGGCGCG CATTCGTCTC GCCCCGCAAA AGGATTGGGA AGTTAACCAG
CCGGCTCAGT TGAAGCTCGT GCTTGAGACC CTTGAGGGAA TCCAAAAACA GTTCAACAGC
GCCCAGTCCG GCGGGAAGCG GGTATCGATA GCCGATTTGA TCGTTCTTGG TGGATGCGCT
GCCGTAGAGC TGGCCGCAAG GAATGCCGGC CACGAAATTA TTGTTCCGTT CACGCCGGGA
CGCACCGATG CGGCGCAGGA GCAAACCGAC GTGGTGGCGT TTGCCCCCCT TGAACCGGCA
GCGGACGGGT TCCGAAACTA CCTCAAAACA AGGTACTCGG TATCGGCGGA AGAGTTGCTT
GTCGACCGAG CGCAATTGCT GACGCTGAGT GCGCCAGAGA TGACGGTCCT CATCGGCGGC
ATGCGTGTCT TGGATGCTAA CGCCGATCGG TCCCGGCACG GGGTGTTCAC CCGGCGGCCG
GGAACGCTCA CCAATGACTT CTTCGTAAAT CTGCTCGATA TGGGCACCAC GTGGAATGCG
ACCTCGGAAG CCGAAGATGT GTTCGAGGGT CGTGACCGCG TAACGGGCGA AATGAAGTGG
ACCGGCACCC GTGTCGACCT CATTTTCGGT TCCAATTCTC TGCTCCGAGC CCAGGCGGAA
GTATACGGTT GCAAGGACGC ACAGGAGAAG TTCGTGGTTG ACTTCATAGC GGCCTGGAGC
AAGGTGATGA ATCTCGACCG CTTCGATATC GCCAACTCAT AG
|
|---|
| Protein sequence | MSTDSQCPVT GRANKHAARV GRMNRDWWPN QLNLKILHQH SPLSNPMGGN FNYSEEFKAL
DLAAVRNDIF ELMTNSQDWW PADYGHYGPL FIRMAWHSAG TYRTGDGRGG ARSGSQRFAP
LNSWPDNANL DKARMLLWPI KQKYGKKISW ADLLIFAGNC ALESMGFKTF GFGGGREDIW
EPGEDIYWGA EDTWLGDKRY SGERLLENPL AAVQMGLIYV NPEGPNGNPD PLAAAKDIRE
TFARMAMNDE ETVALIAGGH TFGKCHGAGA ATHVGPEPEG ASIIEQGLGW KCSLGTGRGE
HTITSGLEGA WTTNPVKWDN GFFDVLFSYD WALAKSPAGA HQWIPTDPAA KGTVPDAHNP
AKRHAPMMLT TDLALKLDPI YGPISKRFHE QPDLFADAFA RAWFKLTHRD MGPRACYLGP
EVPAEDLIWQ DPLPARNHEL IDDQDIAELK GKIVTSGLSV SQLVSTAWAS ASTFRSSDRR
GGANGARIRL APQKDWEVNQ PAQLKLVLET LEGIQKQFNS AQSGGKRVSI ADLIVLGGCA
AVELAARNAG HEIIVPFTPG RTDAAQEQTD VVAFAPLEPA ADGFRNYLKT RYSVSAEELL
VDRAQLLTLS APEMTVLIGG MRVLDANADR SRHGVFTRRP GTLTNDFFVN LLDMGTTWNA
TSEAEDVFEG RDRVTGEMKW TGTRVDLIFG SNSLLRAQAE VYGCKDAQEK FVVDFIAAWS
KVMNLDRFDI ANS
|
|---|
| |