| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0283 |
|---|
| Symbol | |
|---|
| ID | 8135590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 349118 |
|---|
| End bp | 350350 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644867903 |
|---|
| Product | putative sensor with HAMP domain |
|---|
| Protein accession | YP_003020125 |
|---|
| Protein GI | 253698936 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 123 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGGA CGACGACTCG GAAAATGTTC GCCTCGCTGT ACCTATTCTC GTTTCTCGTT
GTTGCCGCGG CCATTATCTT CACCGTCAAC TATCAGCAGC GTGCCCAGGC GCTGGTGGAG
GCCCAGGAGA AGGCGAGGCT GATCCTCGAT CACAACCTCG CCATTCACAG CTACTTTTCG
AACCAGCTGA AACCGCGGCT TTTTAACCTT ACGGACAAAA ATCTCCCCGA GGAATACTTC
GATCCTGTAT GGATGTCTTC CACCTACGCG GTGCGCGAGA TCGATCTCTA CAACAAGGCC
TTCTCCAAGA GCGACTTCTA TTACAAGGAG TGCGCGATCA ACGCCCGCAG TCCCCGAAAC
GAGGCGGATC CGGTGGAACG GGCCTTCCTG GAGGAGATCA GTAAGGACCC TAGCGTTTCC
GTCAAGTCCT CGATACGGGA GATCGACGGG AAGCCCTTCT TCGTCGTGAT GCGTCGCGGC
GAGAGCATGG AGAAGAGCTG CCTGCGCTGC CACAGCACCC CGGCCGCGGC GCCCGCCGAC
ATGGTGGCGA GCTACGGCCC CGAGCGCAGC TTCAGCCGTG AGGACGGCGA GCTGGTCTCC
GCCATATCGA TACGCATCCC GCTGCAGGAG GCGTACGCCA ACGCCAACAA ACTCTCCTTG
AAACTCTCCT TGCTGCTCTT GGCCATCCTC GGGGTGTCGT CGGCGGCGGA GTTCCTGGCC
ATGCACCGCA TGCTGCTGAA CCCGCTCACG GACCTGCGGG ACCGCACCGA CGCCATCCTG
CGCGACGAGA GCAAACTCGG GCAGGATATC CCGGAGTTGT CGAGGGCGGA GGAACTAAAA
GAACTAACGG TAACCTTCAA CAACCTTTCC CGCCATTTGC GCAGGGAGAA AGACGGGTTG
GTGGAGCAGG TGAAGGAAAG GACCGCGGAG CTGGAGTCGG CCAACAAGGC GCTGGAGGAA
GACGTACGGG TGCGCGAGCA GATACAGCTC GAACTGGCGG CCAAGGTGGC GCAGCTTCAA
GAGGCTCTGG CCAAGGTGCG GACCCTGGAA GGGATTCTCC CCATCTGTTC CTATTGCAAG
AAGATACGCA CCGATGAGGA GAGCTGGCAG CAGTTGGAGC ACTACATAAG CGAGCACTCC
GATGCGCTCT TCAGCCACGG CGTCTGCCCG TCCTGCTTCC ATGAGGTCCA GCAGGGGTTC
AAGAAAGGGA AGCAGCGGGA TACCAACGAG TGA
|
|---|
| Protein sequence | MLRTTTRKMF ASLYLFSFLV VAAAIIFTVN YQQRAQALVE AQEKARLILD HNLAIHSYFS
NQLKPRLFNL TDKNLPEEYF DPVWMSSTYA VREIDLYNKA FSKSDFYYKE CAINARSPRN
EADPVERAFL EEISKDPSVS VKSSIREIDG KPFFVVMRRG ESMEKSCLRC HSTPAAAPAD
MVASYGPERS FSREDGELVS AISIRIPLQE AYANANKLSL KLSLLLLAIL GVSSAAEFLA
MHRMLLNPLT DLRDRTDAIL RDESKLGQDI PELSRAEELK ELTVTFNNLS RHLRREKDGL
VEQVKERTAE LESANKALEE DVRVREQIQL ELAAKVAQLQ EALAKVRTLE GILPICSYCK
KIRTDEESWQ QLEHYISEHS DALFSHGVCP SCFHEVQQGF KKGKQRDTNE
|
|---|
| |