Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0259 |
Symbol | |
ID | 8135566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 316048 |
End bp | 316734 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644867880 |
Product | protein of unknown function DUF554 |
Protein accession | YP_003020102 |
Protein GI | 253698913 |
COG category | [R] General function prediction only |
COG ID | [COG1811] Uncharacterized membrane protein, possible Na+ channel or pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.000129355 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCATGC AAGGGACAGC GGTAAACGCG GCGGCAATTG TTATCGGCAG CGTGGTCGGC CTCAAGGCCG GGCACCTGAT CCCCGCCCGG GTGCGGGGCA CCGTGATGGC GGGGGTGGGG CTCGCCGTGC TTCTCATCGG GTGCCAGCTG GCCCTGAAGA GCCGGGAACC GATGATCATC ATCGGCTGCC TGATCGGCGG CGGCATCCTG GGCGAGCTTT TGCGCATCGA GGAGCGCCTT GAGAAGCTGG GGAACTGGAT CGGCGACCGT TTCCAGGGAA GCGGGCAAGT GGCCGAGGGT TTCGTCACCG CGAGCCTTCT TTTCTGCGTC GGCGCGATGG CCATCATGGG GTCGCTGCAG GACGGCCTGG GCTCCCGCCC CGAGATCCTC TACGCCAAGG CCGCCCTGGA CGGCATCACC TCCGTGGCTC TCGCCTCCAC CCTAGGCGTC GGCGTCCTCT TCTCGTCACT GGCCGTTTTC GCCTACCAGG GGGCCATCAC CCTGAGCGCG ACGCTGGCCC AGCAGCTGAT GACGCCTTTA GTGGTGCGGG AAATGAACGC CGTCGGAGGG CTGCTCATCC TCGCCATTGG ACTCGATCTT TTGGGGATGA AGCGGGTTCC GGTGGGAAAC CTTCTTCCCG CCGTGTTCCT GGCGCCCCCC CTGGTCATGC TCTTTGCCTC CTCCTGA
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Protein sequence | MIMQGTAVNA AAIVIGSVVG LKAGHLIPAR VRGTVMAGVG LAVLLIGCQL ALKSREPMII IGCLIGGGIL GELLRIEERL EKLGNWIGDR FQGSGQVAEG FVTASLLFCV GAMAIMGSLQ DGLGSRPEIL YAKAALDGIT SVALASTLGV GVLFSSLAVF AYQGAITLSA TLAQQLMTPL VVREMNAVGG LLILAIGLDL LGMKRVPVGN LLPAVFLAPP LVMLFASS
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