Gene GM21_0245 details

Gene Information

• Locus tag: GM21_0245
• Symbol: sucC
• ID: 8135552
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 294118
• End bp: 295278
• Gene Length: 1161 bp
• Protein Length: 386 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644867866
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: YP_003020088
• Protein GI: 253698899
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 50
• Fosmid unclonability p-value: 0.000419135
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAACATCC ACGAATACCA AGCGAAGGAG ATACTGAGCG CATTCGGGAT TCCGGTGCCC 
CGCGGGCGGG TGGCCCTGAC CGCGGACCAG GTCGAGCGCG CCGCGAAGGA GATGGGGGGG 
CGCTGCGTGG TCAAGGCCCA GATCTACGCC GGCGGACGCG GGAAGGCAGG CGGCGTCAAG 
CTGGTGCATC ACCCCGAGCA GGCCCAGGAC CTCGCCAAGG AGTTGTTCGG AAAGACGCTG 
GTGACCCCGC AAACCGGGCC GGAAGGGCTT AAGGTGAGGC GCATCCTGGT CGAGGAGGCG 
GTCGACATCG CCCGCGAGTT CTACCTCTCC ATTACCCTGG ACCGCGGCAC CTCCCGCTAT 
ATCCTGATCG CCTCCGCGGA GGGGGGGATG GAGATAGAGG AGGTAGCGAC GAGGAGCCCC 
GAGAAGATCC ACACCCTGAC CATCGATCCC TTCCTGGGGC TCAGGTCGTT CCAGGCGCGC 
CACATCGCCC TGCAGTTGGG CCTTTCAGGG AGCGTCTGCG AGGACTGCGT CAGCCTCATC 
CTCAACCTCT ACCGCGTCTG CCTCGAAAAG GACTGCGCCC TGGTGGAGAT CAATCCGCTG 
GTCGTGACCC GTGCCGGTTG GCTCATGGCC ATGGACGCGA AGATCACATT CGACGACAAC 
GCCATCTTCA GGCACCGGGA ATACCCCGAC ATGATGGACT ACTCCCAGTT GGACCCCCTG 
GAGATCAACG CGGGAAAATA CGATCTCGCC TACATAAAGC TCACCGGCAC CATCGGCTGC 
CTGGTGAACG GCGCGGGCCT CGCCATGGCG ACTCTCGACG TCCTGAAGGA ATTCGGCGGC 
GAACCCGCGA ACTTCCTGGA CGTGGGGGGT GGGGCCACCC GGGAGAAGGT GGCCGAGGCG 
TTCAAGATCA TCCTGCAGGA CAGCGACGTG AAGGGAATCT TCGTCAACAT CTTCGGCGGG 
ATCATGCGCT GCGACGTGAT CGCCCACGGC ATCATCGAGG CCGCCAGCGA GGTGAACTGC 
ACCCTCCCCA TCGTGGTCCG CATGGACGGC AGCCAGGTCG AGGAAGGGAA GAGGCTTCTT 
ACCGAAAGCG GCCTCAACGT GCAATGCGGC GACAACCTTG GGGACGCGGC CGCGAGGATC 
GTGAAGATGC TCGCGGGGTA G 

 

Protein sequence

MNIHEYQAKE ILSAFGIPVP RGRVALTADQ VERAAKEMGG RCVVKAQIYA GGRGKAGGVK 
LVHHPEQAQD LAKELFGKTL VTPQTGPEGL KVRRILVEEA VDIAREFYLS ITLDRGTSRY 
ILIASAEGGM EIEEVATRSP EKIHTLTIDP FLGLRSFQAR HIALQLGLSG SVCEDCVSLI 
LNLYRVCLEK DCALVEINPL VVTRAGWLMA MDAKITFDDN AIFRHREYPD MMDYSQLDPL 
EINAGKYDLA YIKLTGTIGC LVNGAGLAMA TLDVLKEFGG EPANFLDVGG GATREKVAEA 
FKIILQDSDV KGIFVNIFGG IMRCDVIAHG IIEAASEVNC TLPIVVRMDG SQVEEGKRLL 
TESGLNVQCG DNLGDAAARI VKMLAG