| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0233 |
|---|
| Symbol | groEL |
|---|
| ID | 8135540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 275318 |
|---|
| End bp | 276961 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644867854 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_003020076 |
|---|
| Protein GI | 253698887 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 88 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAA AGCTTATCAA GTTCGATCAG GAAGCACGCA ACTGCATCCT CAAAGGTGTC
AACACCCTGG CAGATGCCGT TAAAGTGACC CTGGGTCCCA AAGGGCGCAA CGTCGTCATC
GAGAAGTCCT ACGGCGCGCC GCTCATCACC AAGGACGGCG TCACCGTCGC CAAGGAAATC
GAGCTGGAAG ACAAGTTCGA GAACATGGGC GCGCAGTTGG TGAAGGAAGT CGCTTCCAAG
ACCTCCGACG TAGCCGGCGA CGGCACCACC ACCGCAACCG TGCTGGCACA GGCTATCTAC
CGCCAGGGCG CCAAGTTGGT CGCCGCGGGT CACAACCCGA TGGAAATCAA GCGCGGCCTG
GACCAGGCCG TCGAGGCCCT GGTCGCCGAG CTGAAGAACA TCTCCAAGCC GATCAAGGAC
CACAAGGAAA TCGCACAGGT CGGCACCATC TCCGCCAACA ACGACAAGAC CATCGGCGAC
ATCATCGCCG AGGCGATGGA GAAGGTCGGC AAGGAAGGGG TTATCACCGT CGAGGAAGCC
AAGGCGATGG AAACCACCCT TGAGACCGTC GAGGGGATGC AGTTCGACCG CGGCTACCTC
TCCCCCTACT TCGTCACCGA TCCGGAGCGC ATGGAAGCCG CGATGGACAA CGTCGCCATC
CTGATCCACG ACAAGAAGAT CGCTAACATG AAGGACCTCC TCCCGGTTCT CGAGCAGACC
GCCAAGTCCG GTCGTCCGCT GCTGATCATC GCCGAGGACA TCGAAGGCGA GGCCCTGGCA
ACTCTCGTGG TCAACAAGCT GCGCGGCGTC CTTAACGTCT GCGCCGTCAA GGCCCCGGGC
TTCGGCGACC GCCGTAAGGC CATGCTTGAA GACATCGCCA TCCTGACCGG CGGCAAGGTG
ATCTCCGAGG AAGTCGGCTT TAAACTCGAG AACACCACCC TCGACATGCT GGGCCAGGCC
AAAAAGATCA CCGTCGACAA GGACAACACC ACCATCATCG ACGGCTTCGG CGCCGAGGCC
GACATCCAGG GGCGCGTCAA GATGATCCGC GCCCAGATCG ATGAGACCTC CTCCGACTAC
GACCGCGAGA AGCTCCAGGA GCGCCTGGCG AAACTTGTGG GCGGCGTTGC CGTCATCAAG
GTCGGTGCCG CTACCGAGAT CGAGATGAAG GAGAAGAAGG CACGCGTCGA AGACGCACTG
CACGCAACCC GCGCAGCGGT CGACGAGGGT ATCGTCCCTG GAGGCGGGGT CGCTTACCTG
CGCGCCATGA AGGTGCTGGA AAACCTTCAG CTCGCACCGG AGCAGCAGTT CGGCGTAAAC
GTGATCAAGC GCGCCCTCGA GGAGCCGATC CGTCAGATCT CCCAGAACGC TGGCGTCGAC
GGCTCCATCG TCGTGGACAA GGTCAAAAAC GGCAAGGATG CCTTCGGCTA CAACGCCGCC
GACGACGTCT ATGTCGACAT GATCGAGGCC GGCATCATCG ACCCGACCAA GGTCTCCAGG
AGCGCGCTGC AGAACGCCGC TTCCGTGGCT GGTCTCATGA TGACGACCGA GGCGATGATC
GCCGACAAGC CGAAGGAAGA AGGCGCGATG CCGGCGATGC CGGGTGGCAT GGGCGGCATG
GGCGGCATGG GCGGCATGAT GTAG
|
|---|
| Protein sequence | MAAKLIKFDQ EARNCILKGV NTLADAVKVT LGPKGRNVVI EKSYGAPLIT KDGVTVAKEI
ELEDKFENMG AQLVKEVASK TSDVAGDGTT TATVLAQAIY RQGAKLVAAG HNPMEIKRGL
DQAVEALVAE LKNISKPIKD HKEIAQVGTI SANNDKTIGD IIAEAMEKVG KEGVITVEEA
KAMETTLETV EGMQFDRGYL SPYFVTDPER MEAAMDNVAI LIHDKKIANM KDLLPVLEQT
AKSGRPLLII AEDIEGEALA TLVVNKLRGV LNVCAVKAPG FGDRRKAMLE DIAILTGGKV
ISEEVGFKLE NTTLDMLGQA KKITVDKDNT TIIDGFGAEA DIQGRVKMIR AQIDETSSDY
DREKLQERLA KLVGGVAVIK VGAATEIEMK EKKARVEDAL HATRAAVDEG IVPGGGVAYL
RAMKVLENLQ LAPEQQFGVN VIKRALEEPI RQISQNAGVD GSIVVDKVKN GKDAFGYNAA
DDVYVDMIEA GIIDPTKVSR SALQNAASVA GLMMTTEAMI ADKPKEEGAM PAMPGGMGGM
GGMGGMM
|
|---|
| |