Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0224 |
Symbol | |
ID | 8135530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 267592 |
End bp | 268332 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644867845 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_003020067 |
Protein GI | 253698878 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAGTT TCTTTCTCGG CGACAACGCC GTCTGCGGCG ACAGCGTGAC TATCACTGGG GAGCTTTACC GCCACATGGC GCGCGTGCTG CGCATAAAGG AAGGGAGCGA GGTTGAGCTG ATCGAGAACG GGGGCGCCCG TCACCGGGGG ACAGTCGAGG AGGTGGGGGC GAAAAAGCTC ACGGTTCGCA TCAGCGCCAG CGTTGCCCCT TCCGCCGAGG AGCCGGGGCT GCGCATCACG CTCCTGCAGG GGATGCCCAA GGGGGAGAAG CTCGACCTGA TCCTGCAGAA ATGCACCGAA CTCGGGGTCG CCGAGGTGGT CGTATTCGAT GCGGCGCGCT CCGTGGTCAA GCTGCACGGG GATCGAAGCG CCGCCCGGCT CTCCCGTTAC GAAAAGATCG TGCAGGAAGC CGCCCGGCAG TCCGGGCGGC ATTCATCCCC GAAGGTGGCC CTGGGAGGGA CCCTCGCCGA GGTGCTGGCG GATTCAAGCC ATGAGGTGAA ACTGCTTCTT TACGAGGGGG AAGAGAAGAC GACCCTCCAC GACTGCTTCG GCGCCGTCGT GGCACCGAAG AGCGTGGCGG TCGTGGTGGG ACCGGAGGGG GGATTAGCCC CGGAGGAGGT GCGGCAGGCG CTGGCGGCGG GGTTCACACC CGTCACCCTG GGAAAGAGGA TCCTGCGCAC CGAGACCGCC GGGCTCGCCA TGCTGTCCAT CCTGCAGTTT CATTGGGGGG ACATGGGGTA G
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Protein sequence | MRSFFLGDNA VCGDSVTITG ELYRHMARVL RIKEGSEVEL IENGGARHRG TVEEVGAKKL TVRISASVAP SAEEPGLRIT LLQGMPKGEK LDLILQKCTE LGVAEVVVFD AARSVVKLHG DRSAARLSRY EKIVQEAARQ SGRHSSPKVA LGGTLAEVLA DSSHEVKLLL YEGEEKTTLH DCFGAVVAPK SVAVVVGPEG GLAPEEVRQA LAAGFTPVTL GKRILRTETA GLAMLSILQF HWGDMG
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