| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0218 |
|---|
| Symbol | |
|---|
| ID | 8135524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 261551 |
|---|
| End bp | 262627 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644867839 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003020061 |
|---|
| Protein GI | 253698872 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
|---|
| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 85 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTTG CCACCATAGC GGAGAGGGTG CGGGCGGGCG CGCGCATCAC GGAGCCGGAG
GCGCTCGTGC TTTTCGAGCA CCCGGACCTC CTGGCGCTCG GGGAACTGGC CCAGTCCGTC
AACGAGCGGC GTAACGGGAA GAGGGTTTTC TTCAACGTCA ACCGCCACAT CAACCACACC
AACATCTGCG TGAACCGATG CCGCTTCTGC GCCTTCTTCC GCAAAGCCGG CGACCCCGGC
GCCTACCTCA TGACTCTGGA CGAGGTTCGC GGCCGCGCCG AGGAGGCGGT GAAGGAAGGG
GCCACCGAGA TCCACGTGGT CGGAGGCCTC CACCCCGAGC TCCCTTTCGA GTTCTACCTG
GAGCTTCTTT CCACCGTCAA GGCGGTCTCG CCGGCGCTGC ACGTGAAAGC CTTCACCGCG
GTCGAGATCG CTTACCTGGC CGAGCTCTCC GGCCTCGGCA TCCCGGCGAC CCTGGAGAAG
CTGAAGGAGG CGGGGCTCGG CTCACTTCCC GGCGGCGGCG CCGAGATCTT CGCGCCGGAG
ATCCGCAACC AGCTCTGCCC GGAGAAGATC AGCGGCGCCG CCTGGCTCTC CATCATGGAG
CAGGTGCACC AGGCGGGGCT CAAGTCCAAT GCCACCATGC TCTACGGGCA CCTGGAGAGC
GTGGCCGACC GGGTGGACCA CATGCGGCAG CTACGCGAGA TGCAGGATCG TACCGGCGGC
TTCCAGGTTT TCATCCCGCT CGCCTTCCAA CCGGAGCATT CGCAGTTGAA GATCGCAGGC
TCCGGCACAA GCGGCGTGGA TGACCTGCGC ACCCTGGCCG TCGCCCGCAT CTACCTGGAC
AACTTCGCCA ACGTCAAGGC CTACTGGGTG ATGCTGGGGG AGAAGATCGC CCAGGTCTCC
CTTTCCTTCG GCGTCAACGA CCTTGACGGT ACCGTGGTCG AGGAGCGGAT CGGGCACGAG
GCGGGGGCCG ATACCCCGCA GACCATGAGC CGCGACAACA TCGTCACCAT GATCAGGAAG
GCCGGCCGCA TACCGGTGGA GCGGGACACG CTCTACCAGG AATTGCGCGT GTATTGA
|
|---|
| Protein sequence | MTFATIAERV RAGARITEPE ALVLFEHPDL LALGELAQSV NERRNGKRVF FNVNRHINHT
NICVNRCRFC AFFRKAGDPG AYLMTLDEVR GRAEEAVKEG ATEIHVVGGL HPELPFEFYL
ELLSTVKAVS PALHVKAFTA VEIAYLAELS GLGIPATLEK LKEAGLGSLP GGGAEIFAPE
IRNQLCPEKI SGAAWLSIME QVHQAGLKSN ATMLYGHLES VADRVDHMRQ LREMQDRTGG
FQVFIPLAFQ PEHSQLKIAG SGTSGVDDLR TLAVARIYLD NFANVKAYWV MLGEKIAQVS
LSFGVNDLDG TVVEERIGHE AGADTPQTMS RDNIVTMIRK AGRIPVERDT LYQELRVY
|
|---|
| |