Gene GM21_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0217 
Symbol 
ID8135523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp260920 
End bp261531 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content67% 
IMG OID644867838 
Product3-octaprenyl-4-hydroxybenzoate carboxy-lyase 
Protein accessionYP_003020060 
Protein GI253698871 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCCCA AACACTTTAC CGTCGCCATC ACCGGCGCCT CGGGCGTCGT CTACGGCCTC 
AAAGTGGTCG AGGAGCTGCT GCGCTGCGGG TCGAGGGTGA GCCTGCTGGT CTCGGAGGCG
GGGTTCGCGG TCCTGCGGCA GGAATGCGGG CTCGACCTCG GAGGCTCCGC CGGCGAGATC
CTGGACGGGG TACGCTCGCA CCTGGGGGTT CCAGGCGAAC TCCTTAGCTA CTACGACTTA
AACGATCTTT TCGCCCCGAT CGCCAGCGGT TCGGCGGCCC CGGACGCCAT GCTGGTGGTC
CCCTGCTCCA TGGGGACGCT GTCGCGGATC AGCTGCGGCA ATTCGGGGAA CCTCCTGGAG
CGGGCGGCTG ACGTCATGCT GAAAGAGGGG CGTCCCCTGG TGCTGGCGCC GCGCGAGACC
CCCTTCAACG CGATTCACCT CGAGCACATG CTGAAGCTGG CCCGGCTCGG GGTGCGCATA
GTGCCGGCCA TGCCCGGCTT CTACCACGAT CCCGAGACCA TAGAGGACCT GGTCGATTTC
GTGGCCGGAA AGGTGCTGGA CGCAGTGCAG GTGGAGCACA CGCTCTTCAG GCGCTGGGGA
AGCCGGCCGT AA
 
Protein sequence
MKPKHFTVAI TGASGVVYGL KVVEELLRCG SRVSLLVSEA GFAVLRQECG LDLGGSAGEI 
LDGVRSHLGV PGELLSYYDL NDLFAPIASG SAAPDAMLVV PCSMGTLSRI SCGNSGNLLE
RAADVMLKEG RPLVLAPRET PFNAIHLEHM LKLARLGVRI VPAMPGFYHD PETIEDLVDF
VAGKVLDAVQ VEHTLFRRWG SRP