| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0209 |
|---|
| Symbol | |
|---|
| ID | 8135514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 248945 |
|---|
| End bp | 251683 |
|---|
| Gene Length | 2739 bp |
|---|
| Protein Length | 912 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644867829 |
|---|
| Product | Phosphoenolpyruvate carboxylase |
|---|
| Protein accession | YP_003020052 |
|---|
| Protein GI | 253698863 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.00083066 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGACA ACAGAGAACA GACACCGGAG AAGTTGCAGC GAGACCTCGA TTACCTGATG
GATTGCCTTG CCGAGATGTT CTCGGGGCTT GGGGAGAAGG AACTTTCCGC CTGCCTGCCG
CGAGCGGGCT CCCTCGCGCC TGGTGTCGAC TGCCGCTTCG TCAGGGCCTG GTCTATAGCG
TTCCAGCTTA TCAGCATGGC GGAGGAGAAC TTCGCCGTGC AAAGCCGCCG GTCCCTGGAA
AGCAGCCATG GCCTCGTGGC GGAGCCGGGG CTTTGGGGGC GGGTCTTGGA GCAGATCAAG
GAGAGCGGGG TGACCGCAGA GGATCTTGCC GCAGCACTCG GCAAGATCCG GGTCGAACCG
GTGCTCACGG CGCATCCGAC CGAGGCGAAG CGCGCCTCGG TGCTGCGGCA CCTGCGTGAA
CTGTACCTGC TGCTGGTCAA GCGCGAGAAT ACCGTTTGGA CTCCTGCCGA AAAGGACGAC
ATCCGCAACG ACATCGTCGC GATGCTGGAG CGTCTGTGGC GCACCGGCGA GATCCACCTG
GAGAAGCCGC ACGTACTGAA CGAGCTCTCC AGCATGATCT ACCACCTGCG CGAGATCTTT
CCCAAGGCGA TCCCCATCCT CGACAAGCGC ATCTGCCGGG CCTGGACCGA GGCCGGTTTA
GCTGGCGCCA TTTCCCCCCT CACCACCGCG CTGCCCCGGA TAAGCTTCAG CACCTGGGTA
GGGGGTGACC GGGACGGCCA CCCGCTGGTG ACGCCGGAAG TGACGGAGGC GACGCTTAAG
GAACTGAGGT TGAACGCGCT CATGCTGATC CACGGCCAGC TCACCACCCT GGGGAGCAGG
CTCAGCTTCT CGCGCCGCCT GATGCTCCCC TCTGCAGAGC TGCAAAAACG GCTGGACCAG
CTCGCTGCCC GCTCCGGGCC GGCTGGGAGC GACGCGCTCA GGCGCAACCC CGAAGAGCCC
TGGCGCCAGA TGGTAAACCT GATCAGGGCG AGGCTCCCGG TCGACGTCAC GGGCGAGGAG
GAGATCCTCT GCGGCGATCT GGGGACACGC TACTGCCACA GCGATGAACT CGCCGGTGAC
CTGAGGCTTT TGAGGGACAG CCTGATGGCC GCCGGGGCCT CACGCCTCGC CTTGGCCGAC
GTGGTCCCGG TGCTCCGCAC GGTCGAGGTG TTCGGCTTCC ATCTGGCCAG CCTGGATATC
CGTCAAAACA GCAGCTACCA CGACAAGGCG GTGGACCAAC TGCTGGCCGC AGCCGGCGTC
TCCGATCACC GGTTTTCACA ATGGAGCGAG GAAAAGCGCC TCGCCTTCCT CGACCAGGAG
CTTGCCTCTC CCCGCCCCTT TGTCCGCGCC GACGCGAAGC CGGGCCCGGA AGCGGAGGGG
GTGCTTGGTT GCTTCCGCGT CCTGGCCGCC CACATCGCCC TCTACGGTAC CGATGCCATC
GGTCCCCTGA TCGTCAGCAT GACCCGCTCG GTTTCGGATC TCTTGGTCGT TTACCTCCTG
GCCAGGGAGG CCGGGCTCAC CGCTGCAGGG GCGGGGGGGC AGGTCTGCCT GCTCCCGGTG
GTGCCCCTTT TCGAGACCAT CGACGATCTG CAGGGGAGTT CCGCAATACT GGAGGCCTTC
CTCGTCCATC CCGCCACCCG CCGCACCCTG GCGCATCTGC ATGGCGACAA GCCGGTACAG
CAGGTGATGG TAGGCTACAG CGACAGCAAC AAAGACGGCG GGATCCTGGC GAGCCTGTGG
AGCCTGTACC GCGGCCAGGA AGCTATGCTG GCTACTGCCC GGCGCTTAGG GGTGCGGCTG
CGGTTTTTTC ACGGTCGCGG CGGCACCATC AGCCGCGGGG CCGGTCCCAC CAGCCGTTTC
CTGCGGGGGC TCCCGGAGGG TTCCGCCGGG GGCGACCTCC GGCTCACCGA GCAGGGGGAG
GTCATTTCCC AGAAGTACTC CAACCCGCTC AACGCGGCCT ACAACCTGGA GCTGCTCCTG
GCCGGGGCCG CAGTGGTGAC GCTAGCGCCG CGCCGCCCCG CCGTTCCCAA AGAGAGGTTG
GAATCGCTCA TGGACCGCCT GGCGCAACGA AGCCGCTTCG CCTACGAGCA GTTGCTGGCG
GAGCCCGGAT TCATTGACTT TTTCCGGCAG GCGACCCCCA TCGATGTCAT CGAATGCAGC
AGCATCGGAT CCCGTCCCGC CCGCCGCAGC AGGTCCGCCA CTCTTTCCGA CCTGCGCGCC
ATTCCCTGGG TCTTCAGTTG GAGCCAGGCT CGTTATTTCC TTTCAGGGTG GTACGGCGTG
GGGTTCGCAC TGGAAGAGCT GCTGAACGAG GACGAGAGAT CCTTTCGCGA GCTGGCCGGC
CACAGCCAGT CCTGGACGGC GCTGCACTAC ATCATAAGCA ATACCGCTAC CAGTGTCGCC
ACCGCCAACC TTCAGATCAT GCAGGCATAT GCCGGTCTGG TCCTGGACCA AGGGGTGAGG
GACCGCATCT TCGCGCTCCT GAAAGGCGAA TACCTTCGCA CCACCCGCAT TCTGGAGGAG
ATCTACGGCG GGGCGCTCGC CGAGCGCCGG GCCTCGGTGT ACTCCTCGCT GGCGCGGCGC
GAGGAAGCCC TTAAGGTGCT GCACGACCGC CAGATCGACC TGCTGCGCCA GTGGCGGCGC
CCCGAGGCGC AGCAAAACCG GGCCCAATGC GAGGAACTCC TGTTCCGGCT CCTGGAGACG
ATAAACGCCA TCGCCGCAGG CCTGGGCACC ACCGGCTGA
|
|---|
| Protein sequence | MQDNREQTPE KLQRDLDYLM DCLAEMFSGL GEKELSACLP RAGSLAPGVD CRFVRAWSIA
FQLISMAEEN FAVQSRRSLE SSHGLVAEPG LWGRVLEQIK ESGVTAEDLA AALGKIRVEP
VLTAHPTEAK RASVLRHLRE LYLLLVKREN TVWTPAEKDD IRNDIVAMLE RLWRTGEIHL
EKPHVLNELS SMIYHLREIF PKAIPILDKR ICRAWTEAGL AGAISPLTTA LPRISFSTWV
GGDRDGHPLV TPEVTEATLK ELRLNALMLI HGQLTTLGSR LSFSRRLMLP SAELQKRLDQ
LAARSGPAGS DALRRNPEEP WRQMVNLIRA RLPVDVTGEE EILCGDLGTR YCHSDELAGD
LRLLRDSLMA AGASRLALAD VVPVLRTVEV FGFHLASLDI RQNSSYHDKA VDQLLAAAGV
SDHRFSQWSE EKRLAFLDQE LASPRPFVRA DAKPGPEAEG VLGCFRVLAA HIALYGTDAI
GPLIVSMTRS VSDLLVVYLL AREAGLTAAG AGGQVCLLPV VPLFETIDDL QGSSAILEAF
LVHPATRRTL AHLHGDKPVQ QVMVGYSDSN KDGGILASLW SLYRGQEAML ATARRLGVRL
RFFHGRGGTI SRGAGPTSRF LRGLPEGSAG GDLRLTEQGE VISQKYSNPL NAAYNLELLL
AGAAVVTLAP RRPAVPKERL ESLMDRLAQR SRFAYEQLLA EPGFIDFFRQ ATPIDVIECS
SIGSRPARRS RSATLSDLRA IPWVFSWSQA RYFLSGWYGV GFALEELLNE DERSFRELAG
HSQSWTALHY IISNTATSVA TANLQIMQAY AGLVLDQGVR DRIFALLKGE YLRTTRILEE
IYGGALAERR ASVYSSLARR EEALKVLHDR QIDLLRQWRR PEAQQNRAQC EELLFRLLET
INAIAAGLGT TG
|
|---|
| |