Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0190 |
Symbol | |
ID | 8135493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 226378 |
End bp | 227112 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644867809 |
Product | pentapeptide repeat protein |
Protein accession | YP_003020033 |
Protein GI | 253698844 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 3.37345e-35 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAATCGCC GTCTTTTATC ACATACGGCT TATATTTCCC TCGCCGGCTG GCTTGTTGCC GCGGCTGTCC CGGCCGGCGA CGCCCACGCG GCAGCACCGA CAGCCCCAGC ATCCCCCGCA GCTCCGGCAA AGACCGGCGC CGCTACCGCT GCGACCGACG CAGCGGCCAA AGATGCCGCC AGTGCCGACG CGCGCGCGCT CAATGAGGCC AAGGCTAAGC TGGCGGCGCT GGCCAAGGAG GGGGCCAGTG AAGGGCCCTC GGCGGCCGCT GACAAGAAGG TTCAGGTGAA GAAAAAGGCG CTGGCTAAAA AGCAGAAAAA GGGAGCGGCC AAGGCGGGCT CGAAGGCAAA AAGGAAGGTG AAGCAAGGGG CGAAAGGGGC CGAGGTCAAG GTGAAGGTCC TGAACCGGCA CATGACGCAG GCCGAGCTTC AGGGGGTCCT CAGCACCACG CGCGACTTCT CCGGCACCGA CCTGAGCGGG GTAAACCTGG TGGGGTACGA CCTGACCGGG GCCAATTTCA GCAGGGCCAA CCTCCATGCC GCCAACCTGG AGCGGGCCAA GCTGGATGAG GCGGACTTGG AACTGGCGGA CCTGACCGGC GCCAACCTGC GCGGCGCCTC CCTGAATCAG GCCCGCCTGC GGGGAACGAG GCTGGCGGGG GCAAAGCTTG AGGGGGCGCT TTGGACCGAC AAGACGGTCT GCCGGAAAGG TTCGCTCGGG AGCTGTATAG AGTAG
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Protein sequence | MNRRLLSHTA YISLAGWLVA AAVPAGDAHA AAPTAPASPA APAKTGAATA ATDAAAKDAA SADARALNEA KAKLAALAKE GASEGPSAAA DKKVQVKKKA LAKKQKKGAA KAGSKAKRKV KQGAKGAEVK VKVLNRHMTQ AELQGVLSTT RDFSGTDLSG VNLVGYDLTG ANFSRANLHA ANLERAKLDE ADLELADLTG ANLRGASLNQ ARLRGTRLAG AKLEGALWTD KTVCRKGSLG SCIE
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