Gene GM21_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0184 
Symbol 
ID8135487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp219325 
End bp220665 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content61% 
IMG OID644867803 
Productdiguanylate cyclase 
Protein accessionYP_003020027 
Protein GI253698838 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0000000000000988954 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCATCAC CCACCAATAC AAATGCTGCC GCGAAACTCA GCCTGCCAAG GCTGACCCTG 
ATACAGAAGA TCGGCGCGGG CTATGCCGCC ATGGCTTTTT TCACCATGGC AGCACTTGTC
TTCTCTACTT TCAACATCTA CAAGAGCAAC AACACCTCCA GGCAAATCGC AAACAACGAT
CTTCCGGTCA TGAGCGCCCT CATTGAACTG CGCACCTCGC TGTTGGCCCA GGAGGGGTTC
GCCGGCAAGT ACGCTATCCT GCGAGATCCT GCGTTCATCG ATCTGTTCCG GCAGCGCGAG
TCGGAAGCGC TTCAGAACCT GGCGGTCTTG GAGCGCTCAG GCGCGCAGCA GGACGCCACC
CATCTAAAGC AGATGTACCT AAGCTACCAG GGCGCGTCGG CGAAACTGTT CTCCGGTATT
CCGGGAAGCG AAATTCGCTT GCGGCGGTCG GCGCGGCAGC TTCTGGACGC GGTGGACGCC
ACCTACGTTA AGCGCAAAGC GATCCTGCAT GCTGTGCTGG CAAAGGCGAA CGAGCAGCAA
AAGGCTACCA TCTGGTGGAC CGTGGCCATC TCCCTGACCG GGTTCCTGCT GGCCATAGGG
GTCGCCCCAT TCGTCACCTA TCGCATCTTC GGGGCCATCA GGAAGTTGCA AAGCGCAACG
CACAGGATCG CCGCCGGGGA CTTCGACTAC GATCCGCAGA TCCCGCTCGG GGACGAGATC
AGCGACCTGG CGAGGGATTT CACCAAAATG GCGGCGAGGC TCAAGGTCCT CGAACAGATG
AGCCTCGATG CCAGCCCCCT GACCAGGCTC CCCGGCAACT TCGCCATCGA ACGGGAACTG
GAGGAGCGGC TGGAAAGCGG GGCACCCTTC GCCTTTTGCT ACGCCGATCT GGACAACTTC
AAGCCGTTTG GCGACCACTA CGGTTATGCC AAGGGTAGCG AGCTGCTTCG GCTGACAGGC
GACCTGATCC TGGCGGCGGT TAAGGCGCAA GCAGGCGGCG CCGGCTTCGT CGGCCACGTG
GGAGGCGACG ACTTCGTGAT GGTGGTTCCG ACCGACAGGG TAAAAGCGGT CTGCGAGGCG
GTGATCGAGA ACTTCAACGC CGAGGTTGTG AAGCACTACA GCCAGCAGGA CCTGAAGGCA
GGCGGCATCG AGGGATGCGA CCGCTACGGT GTGCAGCGCT TTTTCCCGGT GGTCACCATT
TCCATCGCCG CGATCATCTG CGGCAGGGAC CAGTTCTCGT CGGCCGTAGA CATTGCCAGG
GCCGCAGCCA AAGTGAAAGA CAGCGCCAAG GAGACCCCGG GAAGCAACTA TCTTGTAGGG
ACACCAGGGG ATGCCGCATG A
 
Protein sequence
MSSPTNTNAA AKLSLPRLTL IQKIGAGYAA MAFFTMAALV FSTFNIYKSN NTSRQIANND 
LPVMSALIEL RTSLLAQEGF AGKYAILRDP AFIDLFRQRE SEALQNLAVL ERSGAQQDAT
HLKQMYLSYQ GASAKLFSGI PGSEIRLRRS ARQLLDAVDA TYVKRKAILH AVLAKANEQQ
KATIWWTVAI SLTGFLLAIG VAPFVTYRIF GAIRKLQSAT HRIAAGDFDY DPQIPLGDEI
SDLARDFTKM AARLKVLEQM SLDASPLTRL PGNFAIEREL EERLESGAPF AFCYADLDNF
KPFGDHYGYA KGSELLRLTG DLILAAVKAQ AGGAGFVGHV GGDDFVMVVP TDRVKAVCEA
VIENFNAEVV KHYSQQDLKA GGIEGCDRYG VQRFFPVVTI SIAAIICGRD QFSSAVDIAR
AAAKVKDSAK ETPGSNYLVG TPGDAA