Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0184 |
Symbol | |
ID | 8135487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 219325 |
End bp | 220665 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644867803 |
Product | diguanylate cyclase |
Protein accession | YP_003020027 |
Protein GI | 253698838 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0000000000000988954 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCATCAC CCACCAATAC AAATGCTGCC GCGAAACTCA GCCTGCCAAG GCTGACCCTG ATACAGAAGA TCGGCGCGGG CTATGCCGCC ATGGCTTTTT TCACCATGGC AGCACTTGTC TTCTCTACTT TCAACATCTA CAAGAGCAAC AACACCTCCA GGCAAATCGC AAACAACGAT CTTCCGGTCA TGAGCGCCCT CATTGAACTG CGCACCTCGC TGTTGGCCCA GGAGGGGTTC GCCGGCAAGT ACGCTATCCT GCGAGATCCT GCGTTCATCG ATCTGTTCCG GCAGCGCGAG TCGGAAGCGC TTCAGAACCT GGCGGTCTTG GAGCGCTCAG GCGCGCAGCA GGACGCCACC CATCTAAAGC AGATGTACCT AAGCTACCAG GGCGCGTCGG CGAAACTGTT CTCCGGTATT CCGGGAAGCG AAATTCGCTT GCGGCGGTCG GCGCGGCAGC TTCTGGACGC GGTGGACGCC ACCTACGTTA AGCGCAAAGC GATCCTGCAT GCTGTGCTGG CAAAGGCGAA CGAGCAGCAA AAGGCTACCA TCTGGTGGAC CGTGGCCATC TCCCTGACCG GGTTCCTGCT GGCCATAGGG GTCGCCCCAT TCGTCACCTA TCGCATCTTC GGGGCCATCA GGAAGTTGCA AAGCGCAACG CACAGGATCG CCGCCGGGGA CTTCGACTAC GATCCGCAGA TCCCGCTCGG GGACGAGATC AGCGACCTGG CGAGGGATTT CACCAAAATG GCGGCGAGGC TCAAGGTCCT CGAACAGATG AGCCTCGATG CCAGCCCCCT GACCAGGCTC CCCGGCAACT TCGCCATCGA ACGGGAACTG GAGGAGCGGC TGGAAAGCGG GGCACCCTTC GCCTTTTGCT ACGCCGATCT GGACAACTTC AAGCCGTTTG GCGACCACTA CGGTTATGCC AAGGGTAGCG AGCTGCTTCG GCTGACAGGC GACCTGATCC TGGCGGCGGT TAAGGCGCAA GCAGGCGGCG CCGGCTTCGT CGGCCACGTG GGAGGCGACG ACTTCGTGAT GGTGGTTCCG ACCGACAGGG TAAAAGCGGT CTGCGAGGCG GTGATCGAGA ACTTCAACGC CGAGGTTGTG AAGCACTACA GCCAGCAGGA CCTGAAGGCA GGCGGCATCG AGGGATGCGA CCGCTACGGT GTGCAGCGCT TTTTCCCGGT GGTCACCATT TCCATCGCCG CGATCATCTG CGGCAGGGAC CAGTTCTCGT CGGCCGTAGA CATTGCCAGG GCCGCAGCCA AAGTGAAAGA CAGCGCCAAG GAGACCCCGG GAAGCAACTA TCTTGTAGGG ACACCAGGGG ATGCCGCATG A
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Protein sequence | MSSPTNTNAA AKLSLPRLTL IQKIGAGYAA MAFFTMAALV FSTFNIYKSN NTSRQIANND LPVMSALIEL RTSLLAQEGF AGKYAILRDP AFIDLFRQRE SEALQNLAVL ERSGAQQDAT HLKQMYLSYQ GASAKLFSGI PGSEIRLRRS ARQLLDAVDA TYVKRKAILH AVLAKANEQQ KATIWWTVAI SLTGFLLAIG VAPFVTYRIF GAIRKLQSAT HRIAAGDFDY DPQIPLGDEI SDLARDFTKM AARLKVLEQM SLDASPLTRL PGNFAIEREL EERLESGAPF AFCYADLDNF KPFGDHYGYA KGSELLRLTG DLILAAVKAQ AGGAGFVGHV GGDDFVMVVP TDRVKAVCEA VIENFNAEVV KHYSQQDLKA GGIEGCDRYG VQRFFPVVTI SIAAIICGRD QFSSAVDIAR AAAKVKDSAK ETPGSNYLVG TPGDAA
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