| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0167 |
|---|
| Symbol | |
|---|
| ID | 8135470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 197698 |
|---|
| End bp | 199956 |
|---|
| Gene Length | 2259 bp |
|---|
| Protein Length | 752 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644867786 |
|---|
| Product | primosomal protein N' |
|---|
| Protein accession | YP_003020010 |
|---|
| Protein GI | 253698821 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
|---|
| TIGRFAM ID | [TIGR00595] primosomal protein N' |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.00132621 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACAC CGGTTCCGCA CATAGTCGAG GTAGCGATCC CGCTCCCCCT GGAGGGAAGC
TTCCACTACC TCGTGCCCGA GCGCCTCTCG CCGCAGGCGG CCGCAGGAAA GCGGGTGCTG
GTTCCCTTCG GCAGACGCAA GGTGACCGGG TATCTTCTCG GAGACGCCGA CGCCCCGGGC
GCGGGCGAGC TGAAGGAGGT CCTCGACATC CTGGACGAGG AGCCGCTTTT CACCGCATCG
GAACTCGACT TCTACCGCTG GATCGCAGGC TACTACCTGC ACCCTCTGGG GGAGGTGATC
AAGATGGCGC TTCCCGCCGG GATCAACCTG GTGAGCCGCT ACCGCTGCGA ACAGGGTGAG
GACGGGACCC CGGTGCTGAA GGAGTTTCTG GCTGGCGGCA GGAACGTGAG GACCGAGCGC
TACTTCCTCC CGGTCGCCGA CGAGGAGAGG CGCCCCAGGG GAAAGGGGCT GGAGATCCTC
GAATATCTGC TGGAGATGGG GGAATCTCCG GCGGCCGATC TAAGGAAGCG GTTCGGCAAC
TGCACCCCGC AGTTGAACCG GCTGGTGCAA CTGGGCTGCG CCCGTGTCGA GGCGCGCGAG
GTCTACCGCG ACCCCTTCCG CTCGCAGCAG TACCAGCACG ACGGCCCGCT GCCGCTGAAC
CCCGCGCAAT CCGAGGCGCT CACGCGGCTC ACGGCCTCGA TCAAGGCCCG CGCCTTCTCC
CCGTTCCTGC TGCACGGCGT CACCGGCTCG GGAAAGACCG AGGTATACCT GCAGACGATA
GCGGTCGCGC TCGCCGCCGG GCGGAGCGCG CTGGTGATGG TGCCGGAGAT AGCGCTCACC
CCGCAACTCG TCGGGCGCTT CAAGAGGCGC TTCGACTGCG GTATCGCCGT GCTGCACTCC
GGGCTCTCCG ACGGCGAGCG CTACGACGAG TGGCGCCGCA TCCGGCGCGG CGAGGCCTCC
ATCGTCATCG GCGCCCGCTC CGCCCTCTTC GCGCCGCTGA CGGAGGTGGG CGTCATCGTC
GTGGACGAGG AGCACGAGGG ATCCTACAAG CAGTCGGAGG GGGTGCGCTA CAACGCGCGG
GACCTGGCCC TCGTGCGCGG CAAGCTGGCG GGGGGCGTGG TGATCCTCGG CTCGGCGACC
CCGCTCGTCA CCAGTTACCA TGCCGCGATG AACGGGAAGC TCGGCTACCT CCAGCTCCCG
GACCGGGTGC GCGAACTCCC CATGCCGCAG ACACAGATGC TGGACGCGCG CAGGCAGAAG
GGGGAGGTGT TCCTCCCCCC TCTCATCGAG GCCATGGGGG AGAACCTGGA CAACGGGGGG
CAGACGCTCC TCTTTTTGAA CCGGCGCGGC TTTGCCACCT ACCTCGTCTG CGAGAGCTGC
GGCCACGTGC TCCGCTGCCC CAACTGCGAG GTCACCCTCA CCTTCCATCG CCTGAAGGGA
AAGCACGTCT GCCATTACTG CGACTTCTCC ATGCTCCCCC CGAAGAGCTG TCCTCACTGC
GGCGATGGCG AGATCACTCT ACTGGGGCGG GGGACCGAGC GGGTCGAGGA GCAGGTGCAG
CAGCTTTTCC CGCACGCCCG GGTCTCCCGG ATGGACCGCG ACACCACCAG GGGAAAGGGG
GGGCACGCGC GCGTTCTGAA GGAACTCGAG GAGGGAGAGG TCGACATCCT GATCGGCACC
CAGATGATCG CCAAGGGGCA CGATTTTCCC GGCGTCACCC TGGTCGGGGT GCTCTCGGCC
GACGCCTCCT TGAACCTGCC GGATTTCAGG AGCGCCGAGC GCACCTTTCA GCTCGTTACC
CAGGTGATGG GGAGGGCGGG GAGGGGAGAC AAACCGGGTC GGGTGCTGGT GCAGACACTC
GCGCCCGAGC ACTACGCGCT CACCCACGCG GTGAGCCACG ACTTCCAGGG GTTCTACCGG
GAGGAGATCG CCTTTCGGGA GGAAGTGGGA TATCCCCCCT TCGCCCATCT CGCCTCCCTT
ACCATCTCGG CGGTCGCCGC CTCGCAGGGA GAGCACTCCG CCGACGAGGC CGCAGCGCTT
TTGCAGAAGA TCAAGCGGGA ATGCCGGTTG CGGGTGGAGG TGCTAGGTCC CGTGACGGCG
CCGCTTGGGA AGGTGCGGGG TCGCTTTAGG TGGCAGATCC TGCTGAAGGG GAGGGAGCGG
GCTGACCTGC ACCGGCTGCT GTTCCACTTC AGGGGAGGCT TCAGCCACCC TTCCACGGTC
AGGCTCACCA TCGACGTCGA CCCGGTGGAC ATGCTGTAA
|
|---|
| Protein sequence | MQTPVPHIVE VAIPLPLEGS FHYLVPERLS PQAAAGKRVL VPFGRRKVTG YLLGDADAPG
AGELKEVLDI LDEEPLFTAS ELDFYRWIAG YYLHPLGEVI KMALPAGINL VSRYRCEQGE
DGTPVLKEFL AGGRNVRTER YFLPVADEER RPRGKGLEIL EYLLEMGESP AADLRKRFGN
CTPQLNRLVQ LGCARVEARE VYRDPFRSQQ YQHDGPLPLN PAQSEALTRL TASIKARAFS
PFLLHGVTGS GKTEVYLQTI AVALAAGRSA LVMVPEIALT PQLVGRFKRR FDCGIAVLHS
GLSDGERYDE WRRIRRGEAS IVIGARSALF APLTEVGVIV VDEEHEGSYK QSEGVRYNAR
DLALVRGKLA GGVVILGSAT PLVTSYHAAM NGKLGYLQLP DRVRELPMPQ TQMLDARRQK
GEVFLPPLIE AMGENLDNGG QTLLFLNRRG FATYLVCESC GHVLRCPNCE VTLTFHRLKG
KHVCHYCDFS MLPPKSCPHC GDGEITLLGR GTERVEEQVQ QLFPHARVSR MDRDTTRGKG
GHARVLKELE EGEVDILIGT QMIAKGHDFP GVTLVGVLSA DASLNLPDFR SAERTFQLVT
QVMGRAGRGD KPGRVLVQTL APEHYALTHA VSHDFQGFYR EEIAFREEVG YPPFAHLASL
TISAVAASQG EHSADEAAAL LQKIKRECRL RVEVLGPVTA PLGKVRGRFR WQILLKGRER
ADLHRLLFHF RGGFSHPSTV RLTIDVDPVD ML
|
|---|
| |