Gene GM21_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0124 
Symbol 
ID8135427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp156443 
End bp157222 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content56% 
IMG OID644867744 
ProductKu protein 
Protein accessionYP_003019968 
Protein GI253698779 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCGA TGTGGTCCGG TTCGATCAGC TTTGGCTTGG TGAATATCCC GGTGAAGCTT 
TACAGCGGTT CCCAAAGCAA CAAGCTTGAC TTGGACATGC TGCGCAAGAG CGATCTCTGC
CCCATCAAAT ACCTGAGGGT CTGCAAGAAT GACAATCAGG AGGTCCCCTA TGAGGAGATC
GTCAAAGGTT ATGAGTACAG CGACAGCGAA TACATCGTGC TGACCGACCA GGACTTCGAG
AACGCGAGCC TGGAGAAAAC CCACCTGATC GACATCGTCG ATTTCATAGA CGAGCGGGAA
ATCGACACCA GGTTCTTCGA AAAGCCGTAC TACCTGGAAC CTGAGAAAAC CGGGCCCAAG
GCGTACGCGC TTTTGAGGGA GGCGCTGAAG CGTTCGGGTA AGGTGGGAGT AGCGCATTAC
GTGCTCAGGA ACAGGGGGAG CATCGGCATC CTGAGGCCCC TGGACCAGGT GCTGGTCCTG
AACCAGATCA GGTACGCGGA CGAGGTGCGG GACGCAGCGG ACCTGAAACT GCCGGGGGAC
GAGAATCTGC GCGAGCAGGA GGTGGCGCTG GCACTCTCAT TGATCGACCA GTTGACCGTA
AAGTTCGAGC CCGAGAAATA CAAGGACCAG TACGTAGACG ACCTGAAGCG GATCATCGAG
GAAAAGGCCC AGGGAAGAAT GCCCGCGCCC CAGGCGAAAC AGCCTCCTCC ACCGAAAGTC
GCCGACATGA TGGCGCTTTT GAAGGAGAGC ATTAAGCAGA AAAGAAAGGA AGCGGCCTGA
 
Protein sequence
MRAMWSGSIS FGLVNIPVKL YSGSQSNKLD LDMLRKSDLC PIKYLRVCKN DNQEVPYEEI 
VKGYEYSDSE YIVLTDQDFE NASLEKTHLI DIVDFIDERE IDTRFFEKPY YLEPEKTGPK
AYALLREALK RSGKVGVAHY VLRNRGSIGI LRPLDQVLVL NQIRYADEVR DAADLKLPGD
ENLREQEVAL ALSLIDQLTV KFEPEKYKDQ YVDDLKRIIE EKAQGRMPAP QAKQPPPPKV
ADMMALLKES IKQKRKEAA