Gene GM21_0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0119 
Symbol 
ID8135422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp151254 
End bp152204 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content59% 
IMG OID644867739 
Productribonuclease BN 
Protein accessionYP_003019963 
Protein GI253698774 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value0.605507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCAC TGCGCGGATA CTTCAAGCTG GGCGACACGA GCTACAAGGA ACTGGGCAAA 
AGGGCCTACA AAAAATTCTC GGAAGAGGAC TGCCCGGAAC ACGCCGCCGC CATGGCGTAC
TACTTCCTGT TCGCCTCCTT CCCGTTCCTC CTCTTCCTTA CCACGCTGAT AGCGTACCTG
CCGGTCCCGC ACCTTTTGGA CTACGTGCTG GAAAACGCCT CCAGGCTCCT TCCCGGCGAA
ACCTTCACGC TGATCAAAGA CAACATCCAG GCGCTTTTCA CCAACAAGAA GGAAGGTCTT
CTCTCCATGG GGATCGTGCT CGCGCTCTGG GCTTCCTCCA ACGCCATCGT TTCCGTCATG
GACGCCATGA ACAACCTGTA CGACGTCAAG GAAGGGCGTC CCTTCTGGAA GGTGCGGCTG
ATCGCCATCG GGCTGGTCGT CGGCCTGTCG GTGCTGTTCC TGCTGGCGAT GGCGGCGCTC
ATGTTCGGCA ACCAGATCGG CGACTACGTA GCCGGCTTGA TCCATTTCGG CGAGGCGTTC
AAGGTGGTCT GGTTCGCCGC CCTGGTGCCT ATCACCCTGT TCGTCCTCAT CCTCGCCGTC
GCGGTCATCT ACTATTTCAC CCCCGACGTG GAGCACCAGT GGGTCTGGAT CAGCCCCGGC
GCCGTGATCG CCATCCCAAG CTGGATCTTT ATGTCCCTCG GGTTCTCGGC CTACATCAAC
AACTTCGGCT CCTACGACAA GACCTACGGC AGTATCGGCG CGGTGATCGT GCTGCTGCTC
TGGCTTTACC TGACCGGGCT CATCATTCTG GCGGGCGCCG TGATCAATTC GGTGATCGAG
CACAGCTCCG AGGAAGGAAA GAAACCCGGG GAGAAGGTGG CGGGAGAGGT GAGCGAGCCG
CGCGAGGATG TGAACGAGAA GATGAAGGAA GATAAAGACC AGAAGCGCTA G
 
Protein sequence
MFSLRGYFKL GDTSYKELGK RAYKKFSEED CPEHAAAMAY YFLFASFPFL LFLTTLIAYL 
PVPHLLDYVL ENASRLLPGE TFTLIKDNIQ ALFTNKKEGL LSMGIVLALW ASSNAIVSVM
DAMNNLYDVK EGRPFWKVRL IAIGLVVGLS VLFLLAMAAL MFGNQIGDYV AGLIHFGEAF
KVVWFAALVP ITLFVLILAV AVIYYFTPDV EHQWVWISPG AVIAIPSWIF MSLGFSAYIN
NFGSYDKTYG SIGAVIVLLL WLYLTGLIIL AGAVINSVIE HSSEEGKKPG EKVAGEVSEP
REDVNEKMKE DKDQKR