Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0105 |
Symbol | |
ID | 8135408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 126705 |
End bp | 128579 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644867725 |
Product | Polysulphide reductase NrfD |
Protein accession | YP_003019949 |
Protein GI | 253698760 |
COG category | [C] Energy production and conversion |
COG ID | [COG5557] Polysulphide reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.00267927 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCTGACT TAGGCTACGG CGAGATAAAC GACGACGTCC TGCGCGCGCT GAAGAAACCG GCGTTCCCCT TCTTCCTCGC CGCAGCCGGC CTCGCGGGCG TGGTCGGGCT GGCGGCGCTC GCCTTCATGT ACCAGACCCA GGCGGGGATG GGGGTCACCG GTATGAACCG TCCCGTCGGC TGGGCCGTCT ACATCACCAA CTTCGTCTTC TGGGTCGGGA TCGCCCACTC CGGGACCCTG ATCTCCGCCA TCCTCTACCT GATGCGCGCC GACTGGCGCA ACGCCGTCTC GCGCTCCGCC GAGGCGATGA CCATCTTCGC GGTCCTGACC GCGGGGCTCT TCCCGCTCAT CCACCTGGGG AGGCTTTGGA CCGCCTACTA CATCATCCCC TACCCCTCGC AGCGCCAGAT CTGGCCCAAC TTCGTGAGCC CGCTCGTCTG GGACGTACTC GCCGTCACCA CCTACCTCAC GGTGAGCTCC ATCTTCTGGT TCGTCGGCAT GATCCCCGAT CTCGCCGCGG CGCGCGACCT GCACGAGGAG CAGTTGGGCC CCAGGCACTG GCGCACCCGG CTCTACCGCG CGCTGTCGCT GGGGTGGTCC GGCACCGGGA GCCAGTGGCA CCACTACGGG CGCTCCTACC TCTTCTTCGC CGCCTTCGCC ACGCCCCTCG TGGTCTCGGT GCACTCGGTG GTTTCCTGGG ACTTCGCCAT GAGCCTCCTC CCCGGCTGGC ACAGCGCCAT CTTCCCCCCC TACTTCGTCG CCGGCGCCAT CCACTCGGGT CTCGCCATGG TGATCACCCT GCTGATCCCG ATGCGCAGGT ACCTGCGCCT GGAGCGCCTG ATCGAGATGC GCCACTTCGA GATGCTGGCG AAGACCATCA TCCTCACCGC GACCATCGTC GGCTACGCCT ATGCCGTCGA GGCCTTCATC GCCTGGTACG GCGACGACCC CATCGAGTGG CAGAACCACC TCTGGCGCGT CTTCGGCCCC TCGGCCTGGA TGTACTGGCT TTGCGTCGTC TGCAACGTCT TCGTCCCCTG GCTCTTCCTG TTCAAGAAGA TGCGGACGAG CCTCGTCCCT CTCTTCGTCG TCTCGCTCCT CATCAACCTG GGGATGTGGT TCGAGAGGCT GATGATCATC TACACCTCGC AGGCGCACGA CTTTCTCCCG CACAACTTCG GCGGCTATGC CCCCACCTGG GTCGAACTGA TGATCACCGC CGGCTCCTTC GGCTTCTTCT TCCTCTTCTT CCTGGGCTTC ACCAAGACGC TCCCCACGGT CCCCCTGAGC GAACTGAAGG AGAAGGTCGC CGACGAGGAG ATCAAGCCCG TGGGGAGCTG CGACAGCCGG GTGCATGAGA GGATCGCCCC CCAAAGGCCG AGCGTCTTGG CGCTTTTCTC CAATGCCGGG CGCCTGGTGC AGGCGGCGAA GCTTTCCTGC GACGGGGGGT TCCAGGTGAT GGAGACCTTC TCGCCGGTCA AGATCGAAGC GCTCGACCAC GTGCTCAAAA AGAGAAAGAG CCCGGTCCGC TTCTTCACGC TGGCCGGCGC CGTGAGCGGC CTTGTCGGAG GCTTCTGGCT CGCAGCCGGG ACGGCGCTCG TGAACCGGCT CATCGTGGGG GGAAAGCCGC CGCTCTCCTG GATCCCCTTC TGCGTGGTCG GCTTCGAGGG GACCATCCTT CTCGGGAGCC TCGCCAATCT CCTGGGGCTC GTGCTTTTTT CCCGCCTGTT CCGCCTCCAA ACCGCCCCCT ATTACGACCC CCGCTTCAGC CGCGACCGCT TCGGCCTTTT GGTGAGCTGC AAGGCAGGCG AGGTGGACCG TCTCAAGGAA GAGCTCGCCC CAGCCCTCCC GGAGGAAATC CATGTCCACA AGTGA
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Protein sequence | MADLGYGEIN DDVLRALKKP AFPFFLAAAG LAGVVGLAAL AFMYQTQAGM GVTGMNRPVG WAVYITNFVF WVGIAHSGTL ISAILYLMRA DWRNAVSRSA EAMTIFAVLT AGLFPLIHLG RLWTAYYIIP YPSQRQIWPN FVSPLVWDVL AVTTYLTVSS IFWFVGMIPD LAAARDLHEE QLGPRHWRTR LYRALSLGWS GTGSQWHHYG RSYLFFAAFA TPLVVSVHSV VSWDFAMSLL PGWHSAIFPP YFVAGAIHSG LAMVITLLIP MRRYLRLERL IEMRHFEMLA KTIILTATIV GYAYAVEAFI AWYGDDPIEW QNHLWRVFGP SAWMYWLCVV CNVFVPWLFL FKKMRTSLVP LFVVSLLINL GMWFERLMII YTSQAHDFLP HNFGGYAPTW VELMITAGSF GFFFLFFLGF TKTLPTVPLS ELKEKVADEE IKPVGSCDSR VHERIAPQRP SVLALFSNAG RLVQAAKLSC DGGFQVMETF SPVKIEALDH VLKKRKSPVR FFTLAGAVSG LVGGFWLAAG TALVNRLIVG GKPPLSWIPF CVVGFEGTIL LGSLANLLGL VLFSRLFRLQ TAPYYDPRFS RDRFGLLVSC KAGEVDRLKE ELAPALPEEI HVHK
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