Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0094 |
Symbol | |
ID | 8135397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 116038 |
End bp | 118203 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644867714 |
Product | diguanylate cyclase/phosphodiesterase with extracellular sensor |
Protein accession | YP_003019938 |
Protein GI | 253698749 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.000000375041 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTCCGT TGCGCCTTAG TTTCGTGAGG AACCTGCCGC TTAAGCGCAA GCTGATGCTG ATCATCATGC TCTGCTGCTG CGCCTCCCTG CTGGCGGCGT CCATATTCTT TCTCACCAGG GATGCCAAGG GGGTGTACCG GGTGCAGCGG GAAGACCTGG TCTCGCTGGC GGAGATCATC GGAGCCAACT CCGCCTCGGC CCTGGTCTTC GACGACCCGG AGTCCGCGCA GCGGACCATC GCCCCGCTGG CGAGCAAACG CTCCATCCTG GCCGTTTACG TGTTGACCAG CGAAGGGCAG ATCATGGCGC GCCATGTGGC GCCGGAGGCG GGAAACGCGG AGCTCCCGCT GGAGCGCCTG GGTGCCTCCC CATCGCCGGC TGCCGTGCTC GCGGCCGTGG AGACCATCAG GAAAACGGCC GAAAAGAAGA GCGCCGTCCC CGGTTTCGAC TGTCTGGTGC AGCCGGTCTA CTTCGACTAC GAGCGGGTAG GCACCGTCGT CATCCATGCC GACACCGAGC TGTTTCGGAA AAACCTGCGC TGGACCGCGA CGGTTACCCT GCTTTTCATG CTGGTAACCG TCATCGCGGC CTATTTCTTC TCGGCCAAGC TGCAACAGAT GATCTCCAGG CCGCTACTGG ATCTTCTCTC CTCCATGAAG GACGTCTCAG CCAGCAAGAA CTACGCGATC CGGGTCGCGA AGCCCTCGGA CGACGAGATA GGTCTTCTCT ACGACGGCTT CAACGAGATG CTCTCCGAGA TCGAGGAGCG CAACCAGATC CTCAGGCAGC GCCAGGCGCA CCTGCAGCAA CTGGCGCACT ACGATCCGCT GACCCGGCTC CCCAACCGCA CCCTGTTCTA CGACCGGCTG GCCCAGGCGC TGAACCAGGC CGAGCGGAAC AGGCAGGCCT TGAGCGTGAT CTTCATCGAC CTGGACCACT TCAAGGACAT CAATGACACC CTCGGGCACC GCACCGGCGA CCTGTTGCTG ATCGACGTGG CCAACCGGCT TTCCACCGTG GTGCGCAGTT GCGACACGGT GGCGCGGCTC GGGGGGGACG AGTTCACCGT CTTCACCCAG AACGTGATGA ACGCCGACAA CGCGGCCATC GTGGCGGCGA AGCTGAACGC GCTCTTCGCC AAGCCTTTCC AGTTGGGCGA AAGCGAGATC TACGTCACGG CCAGCATCGG GGTGACCCTG TTCCCCAACG ACGGCAAGAC GGTCGACGAA CTCCTGATGA ACGCGGACAT CGCCATGTAC CACGCGAAAG CCTGCGGCAA GAACGTCTAC AAGATGTTCG ACAGGAAGAT GAACGAGCAC GCCAACGAGA GGGTGACGCT GCTGTCGGAC CTGAGGCTTG CGCTGGAGCG CGAAGAGTTC GTGCTGCACT ACCAGCCCAA GGTGGACCTC CTCACCGGAA ACGTGACTTC GGTGGAGGCC CTGGTGCGCT GGATGCACCC GAGGCTGGGG ATGCTGGCGC CGGACAAGTT CATCCGGCTG AGCGAGGAGA GCGGGTTCAT CGTGGAATTG ACCGACTGGG TGCTGCGCAC CGCCTGCACC CAGGCCAAGA AGTGGCAGGA GCAAAATCTC GGCTCGGTGC GGGTGGCGGT CAACCTCTCG CCGTACCATT TCCAGCGCCA GGACGTGAAG GAAGCGATCT TCTCCGTGCT GGACGCGACG GGCCTCGAGC CGGCGCTCCT CGAGATAGAG ATCACCGAAT CGGCGCTGAT GCAAAACGAC GAGTACACCT GCGCCCTGTT CAGGGAGCTG AGGGAGCTGG GGATGACCAT CTCGGTGGAC GATTTCGGGA CCGGCTATTC CTCCCTAAGC TATCTGCACC GGTTCCCCAT CAACACGCTG AAGATCGACC GGACCTTCAT CCTGAACATG ATGAAGAGCT CCGAGGACCA GGCCATCGTC ACCGCCATCA TCGCCATGGC GAAGAGCCTC AACATGCAGA TCGTCGCGGA GGGGGTGGAG ACGGTGGACC AGTTGGAGAA GCTCAAGGAT CAGGGTTGCC ACGAGATCCA GGGGTTCCTG GTGTCGCGCC CGGTGGCCGC GGAATCGGTC ACCCAGTTCT TCACGCCGGA AAACCACCTG CACCAGCACA CCGCCCCGGC GCAGTCGGAG CCTCCTCAAG GGGGAGCGCC GGCAACACGC CCTTAG
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Protein sequence | MSPLRLSFVR NLPLKRKLML IIMLCCCASL LAASIFFLTR DAKGVYRVQR EDLVSLAEII GANSASALVF DDPESAQRTI APLASKRSIL AVYVLTSEGQ IMARHVAPEA GNAELPLERL GASPSPAAVL AAVETIRKTA EKKSAVPGFD CLVQPVYFDY ERVGTVVIHA DTELFRKNLR WTATVTLLFM LVTVIAAYFF SAKLQQMISR PLLDLLSSMK DVSASKNYAI RVAKPSDDEI GLLYDGFNEM LSEIEERNQI LRQRQAHLQQ LAHYDPLTRL PNRTLFYDRL AQALNQAERN RQALSVIFID LDHFKDINDT LGHRTGDLLL IDVANRLSTV VRSCDTVARL GGDEFTVFTQ NVMNADNAAI VAAKLNALFA KPFQLGESEI YVTASIGVTL FPNDGKTVDE LLMNADIAMY HAKACGKNVY KMFDRKMNEH ANERVTLLSD LRLALEREEF VLHYQPKVDL LTGNVTSVEA LVRWMHPRLG MLAPDKFIRL SEESGFIVEL TDWVLRTACT QAKKWQEQNL GSVRVAVNLS PYHFQRQDVK EAIFSVLDAT GLEPALLEIE ITESALMQND EYTCALFREL RELGMTISVD DFGTGYSSLS YLHRFPINTL KIDRTFILNM MKSSEDQAIV TAIIAMAKSL NMQIVAEGVE TVDQLEKLKD QGCHEIQGFL VSRPVAAESV TQFFTPENHL HQHTAPAQSE PPQGGAPATR P
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