Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0079 |
Symbol | |
ID | 8135378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 104013 |
End bp | 105290 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644867696 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003019924 |
Protein GI | 253698735 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 1.28688e-24 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTAGAGT GCCGGCCGGG GGTAATGACA ATGCATGAAC AGGAGCGGCT GCGCCGGCAG CGCTGGTTTA TTTTCTTTAT CCTGGCCCTG ATCTACATCA TGGTGTACTT CTATCGCGTC TCGCTCGCGG TCGTCGCCAA GGACGTCTCG CGCGACCTGA ACCTCACCCC CTCTCAACTG GGTTCTCTTT CCAGCATCCT CTTCTACGTC TACGCCGCGG CACAGATCCC GCTGGGGCCT ATGATCGACC GACTCGGAAG CCGGGTGGTC ATCAGCGGCT CCGGGGTGCT CACCGCGCTG GGCGGCATCC TCTTCTCCCA GGCGGCCAAC ATGGGGCAGG CCGTGGCCGG CCGCGTTCTC TTAGGGATCG GAACCGCATC GGTGTTGATG GCTACCTTCA CCATCTTCAG CCACTGGTTC ACCAAGCAGG AATTCGGAAA GGTCTCCGGA ATGATGGTCG CGACGGGAAA CCTGGGGAAC CTGGCGGGGA CGGCGCCTTT GGCCTTGGCG GTCGCAGCGG TCGGGTGGCG CAACTCCTTT CTCGCGGCGG GGGTGCTGCA GGCGGTGGTC ACGGTACTGG TTTTCGGCCT GGTGCGAGAC CGCCCCCCCG TTCCCGATCG GCATGAGGAG GAAGCGCCGG CCCGGCTGGG GATGCTTGAA GCATGGAGGA AGATCGTCTC CAACGGGGAC TTCTGGCTCT TGGCCGCGGT GGCGTTCGCC TGGTACGGGA ACTACCTGGC GGTGCAGGGG CTTTGGGGGG GGCCCTACCT GATGGAAGTG GTGAGGCTTA CCCGGGAGGA GACGGGAAGG ATGCTGATGT ACACCTCGCT GGGGTTCATC GCGGGGAGCC TCATGATCGA CCACGTGGCG CGCAGGATCC TCCGTTCCTA CAAGAAGACC CTTCTCGGCG GGCAACTGCT GCTGTTGCTC CTCATGACGA GCTTTCTCGG GCTCGCCGAC AAGATGCCGA CGGCAGCGCT CTCGGCGCTG TTCTTCGGCC TGGGGCTCTG CGTCTCCAGC GGCGTGATGA TCTATCCCAT CATCCGCTCC ATGTTCCCGG TAGCCATAGT GGGGACCGCG CTCACGTCGC TCAACTTCTT CGTGCTGCTG GGGGCCGCAT CGGTGCAGCA GGGGATGGGG ATAATGATCG GCGCGGTCGC GAAGACGACA CCCGAGGCGA CGGCGCAGGC GTATCATTCG GCGTTCCAGC TCCCCATCGG GGCGCTGGCG TTCGCCGCGG CCATGTTCTT CTTCGCCAAG GATTATTGGG AGAAGTAG
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Protein sequence | MLECRPGVMT MHEQERLRRQ RWFIFFILAL IYIMVYFYRV SLAVVAKDVS RDLNLTPSQL GSLSSILFYV YAAAQIPLGP MIDRLGSRVV ISGSGVLTAL GGILFSQAAN MGQAVAGRVL LGIGTASVLM ATFTIFSHWF TKQEFGKVSG MMVATGNLGN LAGTAPLALA VAAVGWRNSF LAAGVLQAVV TVLVFGLVRD RPPVPDRHEE EAPARLGMLE AWRKIVSNGD FWLLAAVAFA WYGNYLAVQG LWGGPYLMEV VRLTREETGR MLMYTSLGFI AGSLMIDHVA RRILRSYKKT LLGGQLLLLL LMTSFLGLAD KMPTAALSAL FFGLGLCVSS GVMIYPIIRS MFPVAIVGTA LTSLNFFVLL GAASVQQGMG IMIGAVAKTT PEATAQAYHS AFQLPIGALA FAAAMFFFAK DYWEK
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