| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0064 |
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| Symbol | |
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| ID | 8135363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 79292 |
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| End bp | 81703 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644867681 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_003019909 |
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| Protein GI | 253698720 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 3.59154e-21 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCAGCT GCAGCCTGAA AATAAAGATG AGCTTGGTCG TCTTCCTGCT TGTCGGGACG
GTGAGTTCGT GCGTTGCCGG TCTGGGACTG CTGTTTTTCA TGCGGGAGTT CAAGGAGACC
ACCGCCGCGC GGCAGTTCGC GGTGGTGAGC GCCATGGCCG GCGAGCTCGA TGAAAAGATC
CTGACGGCGC AGCGCGAGCT TGTCGCGGTG GCGATGAGCA TCCCGCCGGC CACGGCCGGG
GATGCCGCTG CCATGCAGAG TTTCCTCGAC CAACGCCTCG ACCTGCATCA GGTGTTCAGC
GACGGCACGG CTTTCTTCAA CGCAAGCGGA AGGCTCGTCG CCTTCTCTCC GGGGCAGAGC
TACAACATAG GCCGCGATTT CTCCAAGCTA GATTTTCTGG CCGCCACGCT TAAATCGGGG
AAGGCGCTGA TCTCCGACCC TTTCCCGTCG CAGCGAAGGC GCGGACACCA GGTGGTGATG
TTCACCGTCC CGGTGCCGGG GGAGGAGGGG AGGATCATCG GAGTCCTGGG AGGGCGCGTG
GATCTCATGG AAGAAAACTT CCTGAGCCGC GTGGCGCACC TGAACCTCGG GGACGGCGGG
GAATTCTTCC TATTCAACCA GCAAAGGCAG ATGGTCGCGC ACCGCCATCA CGACAAGATC
GGCAAGCCGA TGCTGCCCAA GGGGGAGCGG GAGCTTATGG ACCGCGCCAT TGCCGGATAC
CAGGGGAGCG GCGTGATGGA CAACCCCGCC GGGTTACCCT CCATTTATTC CTTCAGGAGG
CTCCCCAGCC GCGGCTGGAT ACTGGCGGCG GAACGCCCCC TGTACGAGGC GTACGCGCCG
ATTCGCCGGG CACAGAAACT GGTGGTATGG AGCCTCGCCT TGCTGCTCCC TTTGGCGCTG
GTCACCGTTT GGCTCTTCGT CGGCCGCCTC ACCGCGCCGC TGCAGCTCTT CGCCGGGCGC
GTGCGCGAGA TAGGGGGGGA TGCCGGCAAG TACCTCCCGG TACCGGTGCA AAGCCGCGAC
GAGATCGGCG ACCTGGCCCA AGCCTTCAAC GCCATGATGC GGGAACTGGT GATCAACAAG
CGGTCGCTGG AAAGCGAGAA GGGTTTTGCC GTGCAGCTCC TGCAGCACTC GGCGGTCCCC
TGTTTCGTCA TCGACGCCGA GCACCGCGTG ATCATCTGGA ACAGCGCCAT GGAGGAGCTG
ACCGGCGTCG CCGCAGGGGC GCAGCTGGGG CTGACCGACC CTTGGCGTGC CTTTTACGAC
GAGCCGCGCC GCGTTCTGGC CGACATCGTG GTGGCGGGAA CCCTGTACGA GATGGCGGAT
CTCTATTCCT GCTACGCGGA TTCCCCGCTC ATCCCCGAAG GTCTGCGGGC CGAGGGGTGG
TACCGGCTGA AAGGGAAGCA GAAATACCTG GCTTTCGAGG CAGCCCCCAT CCGGGACGCC
GAGGGGACGC TGATCGCCGC CATCCAGACC ATGCAGGACA TGACGCTTCG TGCCAACACC
GAGGAGCAGT TGCGGGGGAT GGTGGCGGCG ATAGGGGAGA GCGAGGAGCG GTTCCGGCGC
CTGGTGGAGC TTTCGCTGGA CGGGATCGCC ATCCTGGTCG GGCGCCGCTT CGTCTTCGTC
AACCCGGCCG GGTGCGAGAT GCTGGGGTAC CGCTCAAGCG ACGAGCTGTT GGGGAAGGAG
ATGCACGAGT TCATCCAGCG GGATTCGGAG CAGCTGTTCC TGGAGCAGGT AGTGTGCGCC
GAGGAAACCG GCACCACCGC TCCCTGGAAA GAGGAGCGGC TGTTGCGCCA CGACCGGACC
GCGGTGGAGG TGGAACTGGG AGTGGGACCG TTCGTTTTCC GCGGAGAAAA CGCGCTGCAG
GTGATCTTCA GGGACATCAC CGAGCGCAAG CTCGCCAAGG CGAGGCTGGA GACCCTGGCC
CACTACGACT CGCTGACCTC GCTCCCCAAC CGGGTGCTCT TCTTCGACCG GCTGCGCCAC
GCGGTATGCG AGGCCAAGCG CTACCAGCAC CCGCTGGCGC TCATGTTCCT GGACCTGGAC
AGCTTCAAGC AGGTGAACGA CCGGCTGGGG CATGCGGCAG GGGACGCGGT GCTGGTGGAG
GCCGGGTATC GCCTGCGGGA GTGCGTGCGG GCCTGCGACA TGGTGGCCCG GATGGGGGGA
GACGAGTTCA CCATCATCCT CACCAAGATG GCGGATAAAG AGGACGCGGC CCTGGTGGCC
GAGAGGGTGA TAGAATCGTT CGCCCTCCCC TTCCTGGTGG AAGGGGAAAG CGCACAGGTG
GGGGTGAGTA TCGGGATCTG CGTCTATCCC GACTGCGACA TCGATCTGGA CGGGATGGTG
CGCTCTGCGG ACTACGCCAT GTACCGGGCC AAGCAGGACG GCAAGAACGT CTACCGCTTC
TACTGCGGCT AG
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| Protein sequence | MSSCSLKIKM SLVVFLLVGT VSSCVAGLGL LFFMREFKET TAARQFAVVS AMAGELDEKI
LTAQRELVAV AMSIPPATAG DAAAMQSFLD QRLDLHQVFS DGTAFFNASG RLVAFSPGQS
YNIGRDFSKL DFLAATLKSG KALISDPFPS QRRRGHQVVM FTVPVPGEEG RIIGVLGGRV
DLMEENFLSR VAHLNLGDGG EFFLFNQQRQ MVAHRHHDKI GKPMLPKGER ELMDRAIAGY
QGSGVMDNPA GLPSIYSFRR LPSRGWILAA ERPLYEAYAP IRRAQKLVVW SLALLLPLAL
VTVWLFVGRL TAPLQLFAGR VREIGGDAGK YLPVPVQSRD EIGDLAQAFN AMMRELVINK
RSLESEKGFA VQLLQHSAVP CFVIDAEHRV IIWNSAMEEL TGVAAGAQLG LTDPWRAFYD
EPRRVLADIV VAGTLYEMAD LYSCYADSPL IPEGLRAEGW YRLKGKQKYL AFEAAPIRDA
EGTLIAAIQT MQDMTLRANT EEQLRGMVAA IGESEERFRR LVELSLDGIA ILVGRRFVFV
NPAGCEMLGY RSSDELLGKE MHEFIQRDSE QLFLEQVVCA EETGTTAPWK EERLLRHDRT
AVEVELGVGP FVFRGENALQ VIFRDITERK LAKARLETLA HYDSLTSLPN RVLFFDRLRH
AVCEAKRYQH PLALMFLDLD SFKQVNDRLG HAAGDAVLVE AGYRLRECVR ACDMVARMGG
DEFTIILTKM ADKEDAALVA ERVIESFALP FLVEGESAQV GVSIGICVYP DCDIDLDGMV
RSADYAMYRA KQDGKNVYRF YCG
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