Gene GM21_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0056 
Symbol 
ID8135355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand- 
Start bp68614 
End bp69240 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content52% 
IMG OID644867673 
Productprotein of unknown function DUF1555 
Protein accessionYP_003019901 
Protein GI253698712 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0000000000096981 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAGGT TGACGGTCAT AACATTGCTC GCATGGATGA TGCTGCTAGG CACCACAGCG 
GCGTCCTCCG CCACCGTCCT GACTTTCGAC GAAATCAAAA CAACTGGTGA CAATCAAATA 
GATGTCCCAG ACGGCTATGG CGGGTTGACT TGGCAGAACA TTTGGGCCAC GAACACTGAT 
GACGAAACCC GTGGCCCAGG TTACAGAAAT GGCACTGTGT CCGGGTCAAT CGTTGCGTTC 
AACGCTGATG GCCGTCCCGG GACCATCAGC GACAGACTCT TCGATTTTAA TGGAGCTTAC 
CTGACCGCAG CGTGGAACAA CGGATTGAAC ATTCAAGTGC AAGGGTACCG TGGCGGCAAC 
TTGGCATACG ATAGGACTGT GGTTGTTGAT ACCACAGCCC CGACGTTCTT TCTTTTCGAT 
TATGCAGGAG TCGATAGGTT GACCTTTGAC TCTTTCGGAG GGACGAATGC AGGCTATGGC 
GGTGTGGGAT TTCATTTCGC AATGGACAAT TTCACCTTCA ACGAAACCAC TCCTATCCCC 
GAACCATCCA CCTTCCTGCT TCTTGGGGCG GGTATCATGG CCGTTGCTTG TCTTCGAAAG 
GGTATGACGA GGTCGCAAGT ACGGTAG
 
Protein sequence
MKRLTVITLL AWMMLLGTTA ASSATVLTFD EIKTTGDNQI DVPDGYGGLT WQNIWATNTD 
DETRGPGYRN GTVSGSIVAF NADGRPGTIS DRLFDFNGAY LTAAWNNGLN IQVQGYRGGN 
LAYDRTVVVD TTAPTFFLFD YAGVDRLTFD SFGGTNAGYG GVGFHFAMDN FTFNETTPIP 
EPSTFLLLGA GIMAVACLRK GMTRSQVR